chr1 : 157,050,690 157,051,299
609 bp 32 TFs 1 linked gene
This 609 bp open chromatin element is linked to ARHGEF11 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ARHGEF11 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:157,045,690 – 157,056,299
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 530 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 188 bp overlap
EBF1 6 datasets
ChIP GM12878 ENCFF167CZS 214 bp overlap
ChIP GM12878 ENCFF813OXE 233 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 424 bp overlap
ChIP LCL GSE75503.EBF1.LCL 295 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 244 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 183 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 179 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 347 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 311 bp overlap
FOXA1 2 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 72 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 96 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 244 bp overlap
ChIP DE DE-FOXA2-2 291 bp overlap
ChIP DE DE-FOXA2-2 246 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 609 bp overlap
ChIP DE DE-GATA4-2 609 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 574 bp overlap
ChIP DE DE-GATA6-2 609 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 553 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 609 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 445 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 368 bp overlap
HOXB13 1 dataset
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 196 bp overlap
KDM3A 1 dataset
ChIP 22Rv1_pLKO GSE109748.KDM3A.22Rv1_pLKO 128 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 547 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 148 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 473 bp overlap
RELA 1 dataset
ChIP GM12878 ENCSR664POU.RELA.GM12878 174 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 183 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 91 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 609 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 405 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 247 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 193 bp overlap
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 252 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 333 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 585 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 134 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 311 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 292 bp overlap