chr7 : 20,086,466 – 20,087,310
844 bp 54 TFs 2 linked genes
This 844 bp open chromatin element is linked to ENSG00000243004 and ITGB8 and is bound by 54 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000243004 36.2 kb Distal Multiome
ITGB8 243.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:20,081,466 – 20,092,310
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
BARX2 1 dataset
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
BCL6B 1 dataset
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
CTCFL 1 dataset
Motif DE_48h DE_48h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 249 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 431 bp overlap
ETV5::FOXI1 1 dataset
Motif DE_48h DE_48h-ETV5FOXI1_MA1946.2 12 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 654 bp overlap
ChIP DE DE-FOXA2-2 663 bp overlap
FOXO1::FLI1 1 dataset
Motif DE_48h DE_48h-FOXO1FLI1_MA1956.2 13 bp overlap
GATA1::TAL1 1 dataset
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 1 dataset
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 686 bp overlap
ChIP DE DE-GATA4-2 844 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 381 bp overlap
GATA5 4 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 228 bp overlap
ChIP DE DE-GATA6-1 609 bp overlap
ChIP DE DE-GATA6-2 844 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 474 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 593 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 497 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 709 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 537 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 403 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 558 bp overlap
ChIP foregut GSE117136.GATA6.foregut 424 bp overlap
Gata3 5 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HMBOX1 2 datasets
Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap
HNF1A 1 dataset
Motif DE_48h DE_48h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif DE_48h DE_48h-HNF1B_MA0153.2 13 bp overlap
Hand1::Tcf3 2 datasets
Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_48h DE_48h-Hand1Tcf3_MA0092.2 9 bp overlap
Hmga1 5 datasets
Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap
Motif DE_48h DE_48h-Hmga1_MA2124.1 8 bp overlap
Motif DE_48h DE_48h-Hmga1_MA2124.1 8 bp overlap
Motif DE_48h DE_48h-Hmga1_MA2124.1 8 bp overlap
Motif DE_60h DE_60h-Hmga1_MA2124.1 8 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 457 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 97 bp overlap
LHX6 1 dataset
Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap
LIN54 1 dataset
Motif DE_48h DE_48h-LIN54_MA0619.2 7 bp overlap
Lhx3 1 dataset
Motif DE_48h DE_48h-Lhx3_MA0135.2 12 bp overlap
Mecom 1 dataset
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NR2C1 1 dataset
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
Nr2e1 1 dataset
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
PHOX2B 1 dataset
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_48h DE_48h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 1 dataset
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap
RORB 1 dataset
Motif DE_48h DE_48h-RORB_MA1150.2 10 bp overlap
Rarb 1 dataset
Motif DE_48h DE_48h-Rarb_MA0857.1 16 bp overlap
SMAD2 2 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 665 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 610 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 302 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 451 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 581 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 699 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 830 bp overlap
SOX10 1 dataset
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 395 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 496 bp overlap
SOX4 1 dataset
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Stat2 1 dataset
Motif DE_48h DE_48h-Stat2_MA1623.2 10 bp overlap
TBX18 1 dataset
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TRPS1 5 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZBTB26 1 dataset
Motif DE_48h DE_48h-ZBTB26_MA1579.2 8 bp overlap
ZNF354C 1 dataset
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
ZNF582 1 dataset
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
ZNF652 1 dataset
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
ZNF766 3 datasets
Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
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