chr6 : 138,529,627 – 138,529,817
190 bp 28 TFs 0 linked genes
This 190 bp open chromatin element has no linked target genes and is bound by 28 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:138,524,627 – 138,534,817
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 127 bp overlap
BRD4 1 dataset
ChIP HAP1 GSE108387.BRD4.HAP1 179 bp overlap
CTCF 104 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 143 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 190 bp overlap
ChIP A673 ENCFF123WOM 190 bp overlap
ChIP AG04450 ENCFF116DJL 190 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 119 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 120 bp overlap
ChIP GM23338 ENCFF531QOI 190 bp overlap
ChIP GM23338 ENCFF772DML 175 bp overlap
ChIP H1 ENCFF414GZI 164 bp overlap
ChIP H1 ENCFF764RHO 184 bp overlap
ChIP H9 ENCFF152GTF 122 bp overlap
ChIP H9 ENCFF152GTF 139 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 190 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 190 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 190 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 190 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 190 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 190 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 190 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 190 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 190 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 132 bp overlap
ChIP HepG2 ENCFF127KUP 189 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 57 bp overlap
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 149 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP MCF-7 ENCFF198DQX 190 bp overlap
ChIP MCF-7 ENCFF494VXA 190 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 190 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 151 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 153 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 131 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 190 bp overlap
ChIP Panc1 ENCFF056JQX 190 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 151 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 124 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 108 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 102 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 176 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 171 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 171 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 190 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 190 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 190 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 162 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 183 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 190 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 190 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 190 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 190 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 190 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 157 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 157 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 160 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 190 bp overlap
ChIP endodermal cell ENCFF471YCZ 156 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 135 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 190 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 122 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 190 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 169 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 140 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 190 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 149 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 190 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 190 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 182 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 190 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 190 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 190 bp overlap
ChIP heart ENCSR565HBN.CTCF.heart 190 bp overlap
ChIP heart left ventricle ENCFF185CKY 190 bp overlap
ChIP heart left ventricle ENCFF354HOQ 190 bp overlap
ChIP heart left ventricle ENCFF548XHH 190 bp overlap
ChIP heart left ventricle ENCFF575JEQ 190 bp overlap
ChIP heart left ventricle ENCFF842XRG 190 bp overlap
ChIP heart left ventricle ENCFF842XRG 96 bp overlap
ChIP heart left ventricle ENCFF888ERQ 190 bp overlap
ChIP heart left ventricle ENCFF987PUT 190 bp overlap
ChIP heart right ventricle ENCFF027ORH 190 bp overlap
ChIP heart right ventricle ENCFF577TID 190 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 190 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 190 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 190 bp overlap
ChIP hepatocyte ENCFF263BLJ 190 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 174 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 145 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 155 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 123 bp overlap
ChIP islet ERP004003.CTCF.islet 190 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 158 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 190 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 181 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 180 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 190 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 190 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 123 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 86 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 190 bp overlap
ChIP right atrium auricular region ENCFF696NTN 135 bp overlap
ChIP stomach ENCFF370OWL 190 bp overlap
ChIP stomach ENCFF370OWL 161 bp overlap
ChIP stomach ENCSR361KVZ.CTCF.stomach 173 bp overlap
ChIP tibial-nerve ENCSR793YAD.CTCF.tibial-nerve 135 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 163 bp overlap
E2F4 1 dataset
ChIP HepG2 ENCFF311TOD 167 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 136 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 78 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 190 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 147 bp overlap
FOXO4 2 datasets
ChIP HepG2 ENCFF909ISL 133 bp overlap
ChIP HepG2 ENCFF909ISL 190 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 136 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 190 bp overlap
ChIP DE DE-GATA4-2 190 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 190 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 190 bp overlap
ChIP DE DE-GATA6-2 190 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 190 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 135 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 190 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 190 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 190 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 190 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 110 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 190 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 190 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 151 bp overlap
SMARCA4 1 dataset
ChIP NSC GSE125033.SMARCA4.NSC 57 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 78 bp overlap
SPI1 4 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 148 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 126 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 190 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 190 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 169 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 83 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 171 bp overlap
WDR5 1 dataset
ChIP MV4-11_C6nc GSE115377.WDR5.MV4-11_C6nc 124 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 190 bp overlap
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