chr1 : 119,276,680 – 119,276,844
164 bp 28 TFs 0 linked genes
This 164 bp open chromatin element has no linked target genes and is bound by 28 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:119,271,680 – 119,281,844
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 135 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 125 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 90 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 120 bp overlap
CRX 1 dataset
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 111 bp overlap
CTCF 324 datasets
ChIP 22Rv1 ENCFF466OXN 164 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 164 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 164 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 164 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 163 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 164 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 164 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 143 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 164 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 164 bp overlap
ChIP A549 ENCFF182TCQ 164 bp overlap
ChIP A673 ENCFF123WOM 164 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 164 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 155 bp overlap
ChIP C4-2B ENCFF821XVN 164 bp overlap
ChIP Caco-2 ENCFF934QYS 164 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 122 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 137 bp overlap
ChIP D721Med ENCFF513FYD 164 bp overlap
ChIP DND-41 ENCFF913MRA 164 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 160 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 164 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 164 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 164 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 164 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 164 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 164 bp overlap
ChIP GM06990 ENCFF471OQT 164 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 164 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 164 bp overlap
ChIP GM10248 ENCFF083HVS 155 bp overlap
ChIP GM10248 ENCFF226VLZ 155 bp overlap
ChIP GM10266 ENCFF241YYF 151 bp overlap
ChIP GM10266 ENCFF892KUY 151 bp overlap
ChIP GM12864 ENCFF357DQE 164 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 123 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 100 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 107 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 99 bp overlap
ChIP GM12872 ENCFF697BYI 164 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 135 bp overlap
ChIP GM12873 ENCFF711LOS 164 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 153 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 108 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 123 bp overlap
ChIP GM12878 ENCFF217EAX 164 bp overlap
ChIP GM12878 ENCFF485TGR 164 bp overlap
ChIP GM12878 ENCFF511URZ 164 bp overlap
ChIP GM12878 ENCFF635MMB 98 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 164 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 164 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 164 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 149 bp overlap
ChIP GM13977 ENCFF528ESQ 159 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 120 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 164 bp overlap
ChIP GM20000 ENCFF217HWJ 150 bp overlap
ChIP GM20000 ENCSR000DLG.CTCF.GM20000 111 bp overlap
ChIP GM23338 ENCFF531QOI 164 bp overlap
ChIP GM23338 ENCFF772DML 161 bp overlap
ChIP H1 ENCFF230QSV 142 bp overlap
ChIP H1 ENCFF414GZI 164 bp overlap
ChIP H1 ENCFF764RHO 132 bp overlap
ChIP H54 ENCFF255TVO 164 bp overlap
ChIP H9 ENCFF152GTF 164 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 164 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 164 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 164 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 164 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 164 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 164 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 164 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 164 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 127 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 164 bp overlap
ChIP HCT116 ENCFF003KHP 164 bp overlap
ChIP HCT116 ENCFF209YMI 164 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 83 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 93 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 148 bp overlap
ChIP HEK293 ENCFF498RMM 164 bp overlap
ChIP HEK293 ENCFF821TIC 164 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 164 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 142 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 152 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 163 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 164 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 164 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 164 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 164 bp overlap
ChIP HeLa-S3 ENCFF565UFR 159 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 164 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 126 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 107 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 164 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 164 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 164 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 164 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 164 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 164 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 164 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 164 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 124 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 127 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 123 bp overlap
ChIP HepG2 ENCFF348BUL 164 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 163 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 164 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 164 bp overlap
ChIP Ishikawa ENCSR000BQE.CTCF.Ishikawa 111 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 163 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 137 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 164 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 162 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 125 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 124 bp overlap
ChIP K-562_CRISPRi_N4293 GSE131349.CTCF.K-562_CRISPRi_N4293 73 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 164 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 149 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 107 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 164 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 156 bp overlap
ChIP K562 ENCFF082GOI 156 bp overlap
ChIP K562 ENCFF400DFR 164 bp overlap
ChIP K562 ENCFF430KTH 164 bp overlap
ChIP K562 ENCFF598YSU 164 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 164 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 164 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 158 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 126 bp overlap
ChIP LNCAP ENCFF223HIG 164 bp overlap
ChIP LNCAP ENCFF700QXT 164 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 164 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 164 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 159 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 164 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 164 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 164 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 163 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 164 bp overlap
ChIP Loucy ENCFF359TVQ 164 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 157 bp overlap
ChIP MCF 10A ENCFF988BGF 164 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 164 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 164 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 164 bp overlap
ChIP MCF-7 ENCFF139NQI 164 bp overlap
ChIP MCF-7 ENCFF162GNE 140 bp overlap
ChIP MCF-7 ENCFF198DQX 159 bp overlap
ChIP MCF-7 ENCFF210JUZ 164 bp overlap
ChIP MCF-7 ENCFF414SZG 147 bp overlap
ChIP MCF-7 ENCFF424NQR 149 bp overlap
ChIP MCF-7 ENCFF494VXA 162 bp overlap
ChIP MCF-7 ENCFF844STM 147 bp overlap
ChIP MCF-7 ENCFF954TUV 134 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 GSE124667.CTCF.MCF-7 158 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 164 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 164 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 164 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 164 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 164 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 164 bp overlap
ChIP MCF-7_1118 GSE124667.CTCF.MCF-7_1118 133 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 164 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 147 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 164 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 164 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 132 bp overlap
ChIP MCF-7_fulvestrant-resistant GSE118711.CTCF.MCF-7_fulvestrant-resistant 164 bp overlap
ChIP MCF-7_tamoxifen-resistant GSE118711.CTCF.MCF-7_tamoxifen-resistant 164 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 164 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 164 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 164 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 164 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 164 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 164 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 164 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 164 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 164 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 164 bp overlap
ChIP PC-3 ENCFF487TUI 164 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 164 bp overlap
ChIP PC-9 ENCFF539ULB 164 bp overlap
ChIP Panc1 ENCFF056JQX 164 bp overlap
ChIP Peyer's patch ENCFF828IDE 164 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 150 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 164 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 164 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 164 bp overlap
ChIP RWPE2 ENCFF911IEE 164 bp overlap
ChIP SEM GSE117864.CTCF.SEM 145 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 109 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 149 bp overlap
ChIP SK-N-SH ENCFF731NJX 164 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 164 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 120 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 164 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 164 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 164 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 164 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 164 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 164 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 164 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 164 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 164 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 164 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 164 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 164 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 164 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 156 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 164 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 164 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 164 bp overlap
ChIP UPCI-SCC-090 GSE143026.CTCF.UPCI-SCC-090 164 bp overlap
ChIP VCaP ENCFF858YQT 164 bp overlap
ChIP VCaP ENCFF858YQT 164 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 164 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 164 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 164 bp overlap
ChIP VU-SCC-147 GSE143026.CTCF.VU-SCC-147 164 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 146 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 133 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 164 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 164 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 147 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 164 bp overlap
ChIP brain ENCFF163BBN 164 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 118 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 164 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 164 bp overlap
ChIP chondrocyte ENCFF134ORZ 164 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 164 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 142 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 164 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 140 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 164 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 164 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 164 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF255MAF 164 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 164 bp overlap
ChIP endodermal cell ENCFF471YCZ 164 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 164 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 164 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 164 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 164 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 164 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 164 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 164 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 125 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 164 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 123 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 150 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 164 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 164 bp overlap
ChIP esophagus squamous epithelium ENCFF797YPG 164 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 164 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 164 bp overlap
ChIP esophagus_squamous-epithelium ENCSR756URL.CTCF.esophagus_squamous-epithelium 164 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 164 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 164 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 118 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 164 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 164 bp overlap
ChIP hepatocyte ENCFF263BLJ 164 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 164 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 155 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 144 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 133 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 123 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 132 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 149 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 109 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 162 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 157 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 157 bp overlap
ChIP islet ERP004003.CTCF.islet 153 bp overlap
ChIP keratinocyte ENCFF046PBT 159 bp overlap
ChIP keratinocyte ENCFF291YDC 158 bp overlap
ChIP keratinocyte ENCFF667ULX 164 bp overlap
ChIP keratinocyte ENCFF805QIE 164 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 164 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 164 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 164 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 164 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 80 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 164 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 146 bp overlap
ChIP nephron ENCFF411ACD 164 bp overlap
ChIP nephron ENCFF589HXU 164 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 164 bp overlap
ChIP neural cell ENCFF335ADI 164 bp overlap
ChIP neural progenitor cell ENCFF420RBO 149 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 164 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 164 bp overlap
ChIP pancreas ENCFF101CZV 164 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 103 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 164 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 151 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 164 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 114 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 164 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 150 bp overlap
ChIP prostate ENCSR946MNG.CTCF.prostate 164 bp overlap
ChIP prostate gland ENCFF193LJV 164 bp overlap
ChIP prostate gland ENCFF193LJV 73 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 164 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 138 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 164 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 164 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 164 bp overlap
ChIP right lobe of liver ENCFF011NDG 164 bp overlap
ChIP right lobe of liver ENCFF250KSY 164 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 151 bp overlap
ChIP suprapubic skin ENCFF266CTJ 164 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 164 bp overlap
ERG 1 dataset
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 161 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 164 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 164 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 164 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 164 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 164 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 164 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 164 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 164 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 164 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 164 bp overlap
HOXB13 1 dataset
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 130 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 149 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 160 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 164 bp overlap
RAD21 62 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 151 bp overlap
ChIP A549 ENCFF047SFC 164 bp overlap
ChIP GM12878 ENCFF046CBW 164 bp overlap
ChIP GM12878 ENCFF101UQZ 164 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 164 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 164 bp overlap
ChIP H1 ENCFF698EWO 140 bp overlap
ChIP H1 ENCFF967OJF 102 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 164 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 164 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 164 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 164 bp overlap
ChIP HCT116 ENCFF568PEO 164 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 164 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 164 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 164 bp overlap
ChIP HeLa-S3 ENCFF775CHI 164 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 164 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 164 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 157 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 149 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 164 bp overlap
ChIP HepG2 ENCFF360ZSW 164 bp overlap
ChIP HepG2 ENCFF906QIS 109 bp overlap
ChIP Ishikawa ENCFF570JVV 150 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 164 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 135 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 164 bp overlap
ChIP K562 ENCFF169SQI 150 bp overlap
ChIP K562 ENCFF634XYR 94 bp overlap
ChIP MCF-7 ENCFF694KOM 164 bp overlap
ChIP MCF-7 ENCFF724VCQ 157 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 164 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 164 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 164 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 164 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 164 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 148 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 164 bp overlap
ChIP SK-N-SH ENCFF747MAS 164 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 154 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 164 bp overlap
ChIP T-47D GSE111923.RAD21.T-47D 164 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.RAD21.T-47D_NaCl-isotonic-triptolide 164 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 164 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 164 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 164 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 164 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.RAD21.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 155 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 164 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 164 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 158 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 142 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 164 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 164 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 161 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 147 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 164 bp overlap
ChIP liver ENCFF485PAC 164 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 164 bp overlap
ChIP neural cell ENCFF564MOT 164 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 128 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 114 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 124 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 164 bp overlap
SMC1 3 datasets
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 164 bp overlap
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 164 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 164 bp overlap
SMC1A 7 datasets
ChIP A-549 GSE76893.SMC1A.A-549 163 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 164 bp overlap
ChIP LCL GSE38395.SMC1A.LCL 159 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 164 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 164 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 142 bp overlap
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 130 bp overlap
SMC3 7 datasets
ChIP GM12878 ENCFF085RLZ 164 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 116 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 107 bp overlap
ChIP Hep-G2 ENCSR000EDW.SMC3.Hep-G2 129 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 158 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 164 bp overlap
ChIP neural cell ENCFF795YGY 161 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 164 bp overlap
ChIP keratinocyte_SHCTR GSE55421.SNAI2.keratinocyte_SHCTR 140 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 113 bp overlap
STAG1 10 datasets
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 164 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 164 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 164 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 164 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 164 bp overlap
ChIP HepG2 ENCFF843EBZ 164 bp overlap
ChIP MCF-10A GSE101921.STAG1.MCF-10A 126 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 164 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 164 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 147 bp overlap
STAG2 4 datasets
ChIP HL-60 GSE131577.STAG2.HL-60 124 bp overlap
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 164 bp overlap
ChIP MCF-10A GSE101921.STAG2.MCF-10A 164 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 164 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 160 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 155 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 146 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 156 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 164 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 133 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 164 bp overlap
Huangfu Lab · Publications · Resources · Contact