chr1 : 118,991,588 118,992,249
661 bp 27 TFs 3 linked genes
This 661 bp open chromatin element is linked to TBX15, ENSG00000226172, and ENSG00000239216 and is bound by 27 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
TBX15 3.2 kb Proximal Proximity
ENSG00000226172 9.1 kb Proximal Proximity
ENSG00000239216 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:118,986,588 – 118,997,249
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 201 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 207 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 205 bp overlap
CBX2 2 datasets
ChIP K-562 ENCSR000ATU.CBX2.K-562 194 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 374 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 96 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 201 bp overlap
CTCF 8 datasets
ChIP GM04648 GSE148179.CTCF.GM04648 252 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 361 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM23338 ENCFF832KWE 459 bp overlap
ChIP HFFc6 ENCFF005CJI 518 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 169 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 207 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 487 bp overlap
EZH2 10 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 304 bp overlap
ChIP GM23338 ENCFF613YON 437 bp overlap
ChIP GM23338 ENCFF613YON 63 bp overlap
ChIP H1 ENCFF232NZA 661 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 169 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 449 bp overlap
ChIP hepatocyte ENCFF552DZB 616 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 203 bp overlap
ChIP neural progenitor cell ENCFF472NFV 297 bp overlap
ChIP neural progenitor cell ENCFF472NFV 583 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 69 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 218 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 307 bp overlap
JARID2 3 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 261 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 259 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 61 bp overlap
JUN 1 dataset
ChIP T-cell GSE136853.JUN.T-cell 194 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 205 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 91 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 239 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 356 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 94 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 648 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 426 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 205 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 124 bp overlap
RYBP 2 datasets
ChIP WA01 GSE104690.RYBP.WA01 218 bp overlap
ChIP WA01 GSE104690.RYBP.WA01 328 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 63 bp overlap
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 326 bp overlap
SUZ12 3 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 319 bp overlap
ChIP H1 ENCFF881NFR 661 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 109 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 320 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 279 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 218 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 251 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 106 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 196 bp overlap