chr6 : 90,894,177 90,894,582
405 bp 31 TFs 0 linked genes
This 405 bp open chromatin element has no linked target genes and is bound by 31 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:90,889,177 – 90,899,582
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 103 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 142 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 171 bp overlap
ATF2 4 datasets
ChIP HEK293 ENCFF194VKZ 229 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 151 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF955VER 208 bp overlap
CREB1 3 datasets
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 171 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 191 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 174 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 305 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 215 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 231 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 285 bp overlap
ESR1 1 dataset
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 266 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 195 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 147 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 173 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 218 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 218 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 207 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 405 bp overlap
ChIP DE DE-GATA4-2 405 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 310 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 293 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 293 bp overlap
ChIP DE DE-GATA6-2 352 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 277 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 362 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 274 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 314 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 206 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 191 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 139 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 293 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 294 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 126 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 370 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 141 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 207 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 225 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 204 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 176 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCFF847JIE 334 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 55 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 123 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 274 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 283 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 252 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 261 bp overlap