chr6 : 69,801,281 – 69,801,499
218 bp 28 TFs 1 linked gene
This 218 bp open chromatin element is linked to LMBRD1 and is bound by 28 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LMBRD1 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:69,796,281 – 69,806,499
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Arnt 1 dataset
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
CTCF 45 datasets
ChIP CUTLL1 GSE115893.CTCF.CUTLL1 213 bp overlap
ChIP CUTLL1_DMSO GSE130140.CTCF.CUTLL1_DMSO 174 bp overlap
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 164 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 124 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 172 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 183 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 132 bp overlap
ChIP GM12878 ENCFF217EAX 218 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 218 bp overlap
ChIP H9 ENCFF152GTF 218 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 153 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 124 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 171 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 209 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 162 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 171 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 188 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 193 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 175 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 175 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 185 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 186 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 197 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 192 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 120 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 218 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 166 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 218 bp overlap
ChIP MCF-7 ENCFF198DQX 202 bp overlap
ChIP MCF-7 ENCFF414SZG 170 bp overlap
ChIP MCF-7 ENCFF424NQR 179 bp overlap
ChIP MCF-7 ENCFF494VXA 199 bp overlap
ChIP MCF-7 ENCFF844STM 179 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 187 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 144 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 198 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 218 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 139 bp overlap
ChIP endodermal cell ENCFF471YCZ 184 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 102 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 212 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 151 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 153 bp overlap
Creb3l2 1 dataset
Motif DE_12h DE_12h-Creb3l2_MA0608.1 9 bp overlap
E2F6 5 datasets
ChIP H1 ENCFF785DWK 218 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 211 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 150 bp overlap
ChIP K562 ENCFF136LTS 218 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 178 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 92 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 174 bp overlap
MAX 15 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 218 bp overlap
ChIP H1 ENCFF914VQY 178 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 136 bp overlap
ChIP K-562 ENCSR000FAE.MAX.K-562 147 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 128 bp overlap
ChIP K562 ENCFF398VJM 218 bp overlap
ChIP K562 ENCFF524IJO 189 bp overlap
ChIP MCF-7 ENCFF169IXS 218 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 187 bp overlap
ChIP NB4 ENCFF966MWB 216 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 176 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 157 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 146 bp overlap
MAX::MYC 1 dataset
Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap
MNT 7 datasets
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 218 bp overlap
ChIP HepG2 ENCFF701PYP 124 bp overlap
ChIP K-562 ENCSR512NLO.MNT.K-562 201 bp overlap
ChIP K562 ENCFF450LDL 218 bp overlap
ChIP MCF-7 ENCFF144ZFZ 218 bp overlap
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 218 bp overlap
MXI1 3 datasets
ChIP H1 ENCFF963FZS 218 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 127 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 158 bp overlap
MYC 18 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 116 bp overlap
ChIP CUTLL1 GSE90716.MYC.CUTLL1 162 bp overlap
Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap
ChIP H1 ENCFF794ZJT 203 bp overlap
ChIP HT-1080 GSE86504.MYC.HT-1080 164 bp overlap
ChIP K-562 ENCSR000EZU.MYC.K-562 218 bp overlap
ChIP K-562 ENCSR000EGS.MYC.K-562 130 bp overlap
ChIP K-562 ENCSR000EGJ.MYC.K-562 128 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 136 bp overlap
ChIP MCF-7 ENCFF542NWJ 218 bp overlap
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 147 bp overlap
ChIP P493-6_CMYC_24H GSE36354.MYC.P493-6_CMYC_24H 148 bp overlap
ChIP P493-6_SHCTR GSE60223.MYC.P493-6_SHCTR 112 bp overlap
ChIP P493-6_SHTERC GSE60223.MYC.P493-6_SHTERC 170 bp overlap
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 75 bp overlap
ChIP U2OS_EtOH GSE77328.MYC.U2OS_EtOH 88 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 101 bp overlap
ChIP WA01 ENCSR000EBY.MYC.WA01 165 bp overlap
MYCN 8 datasets
ChIP BE2C GSE80151.MYCN.BE2C 157 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 152 bp overlap
Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 165 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 136 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 136 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 157 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 127 bp overlap
Mlxip 1 dataset
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 163 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 174 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 210 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 162 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 135 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 159 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 110 bp overlap
USF1 7 datasets
ChIP H1 ENCFF090WVU 175 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 108 bp overlap
ChIP HepG2 ENCFF201JKA 218 bp overlap
ChIP HepG2 ENCFF807KYJ 179 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 161 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 133 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 183 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 55 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 97 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF592 1 dataset
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 218 bp overlap
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