Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 183 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 103 bp overlap

BRD4 5 datasets

ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 177 bp overlap

ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 111 bp overlap

ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 76 bp overlap

ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 171 bp overlap

ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 140 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

Dmrt1 1 dataset

Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 131 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 132 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 183 bp overlap

ChIP DE DE-FOXA2-2 183 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

GATA2 1 dataset

ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 72 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 183 bp overlap

ChIP DE DE-GATA4-2 183 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 183 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 183 bp overlap

ChIP DE DE-GATA6-2 183 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 183 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 183 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 183 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 183 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 183 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 175 bp overlap

HOXA9 1 dataset

ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 111 bp overlap

IKZF2 1 dataset

ChIP GM12878 ENCFF238LYK 121 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 55 bp overlap

Isl1 1 dataset

Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 182 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 80 bp overlap

NANOG 10 datasets

ChIP GM23338 ENCFF065NZG 176 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 103 bp overlap

ChIP H1 ENCFF747ZPQ 136 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 183 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 112 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 148 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 183 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 183 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 183 bp overlap

ChIP hESC GSE18292.NANOG.hESC 114 bp overlap

NIPBL 4 datasets

ChIP hESC GSE64758.NIPBL.hESC 121 bp overlap

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 126 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 141 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 128 bp overlap

PDX1 2 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 136 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 142 bp overlap

PKNOX1 2 datasets

ChIP HEK293T ENCFF174WDB 183 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 132 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 109 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 161 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 110 bp overlap

PRDM6 3 datasets

ChIP HEK293 ENCFF283AJL 183 bp overlap

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 183 bp overlap

ChIP HEK293 GSE76494.PRDM6.HEK293 183 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 162 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 180 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 183 bp overlap

ChIP neural cell ENCFF882LXX 182 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 183 bp overlap

SIX2 1 dataset

ChIP HEK GSE73865.SIX2.HEK 66 bp overlap

SMAD2 1 dataset

ChIP hESC GSE29422.SMAD2.hESC 141 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 183 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 183 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 183 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 183 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 183 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 183 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 183 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 183 bp overlap

SMARCA4 6 datasets

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 101 bp overlap

ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 183 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 183 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 183 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 95 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 136 bp overlap

SMARCC1 3 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 51 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 179 bp overlap

ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 183 bp overlap

SOX14 1 dataset

Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 183 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 183 bp overlap

ChIP hESC GSE18292.SOX2.hESC 72 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 132 bp overlap

SOX8 1 dataset

Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap

Sox5 1 dataset

Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 96 bp overlap

ZNF274 1 dataset

ChIP HEK293T GSE78099.ZNF274.HEK293T 143 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 182 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 161 bp overlap

Genome Browser