chr5 : 63,570,643 – 63,571,139
496 bp 47 TFs 1 linked gene
This 496 bp open chromatin element is linked to ENSG00000287179 and is bound by 47 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287179 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:63,565,643 – 63,576,139
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 204 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 204 bp overlap
AR 1 dataset
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 111 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 188 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 181 bp overlap
CTCF 61 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 344 bp overlap
ChIP C4-2B ENCFF821XVN 496 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 143 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 394 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 101 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 265 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 357 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 197 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 98 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 248 bp overlap
ChIP MCF-7 ENCFF139NQI 277 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 233 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 129 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 186 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 138 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 118 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 223 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 242 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 249 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 108 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 204 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 103 bp overlap
ChIP SK-N-SH ENCFF575DMG 373 bp overlap
ChIP SK-N-SH ENCFF575DMG 171 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 316 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 217 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 134 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 149 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 102 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 409 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 418 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 460 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 439 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 224 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 152 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 135 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 151 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 231 bp overlap
ChIP endodermal cell ENCFF471YCZ 390 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 256 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 177 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 160 bp overlap
ChIP neural progenitor cell ENCFF420RBO 332 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 256 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 166 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 189 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 441 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 214 bp overlap
ELK1::HOXA1 1 dataset
Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 308 bp overlap
ETV5::HOXA2 1 dataset
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 78 bp overlap
GCM1 1 dataset
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP SK-N-SH ENCFF285LXR 411 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 214 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NFIB 1 dataset
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 496 bp overlap
POU5F1 1 dataset
ChIP hiPSC GSE56567.POU5F1.hiPSC 217 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 114 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 156 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 222 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 162 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 195 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 175 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 122 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 201 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 107 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 169 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 236 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 184 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF680 2 datasets
ChIP HEK293 ENCFF418WHE 59 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 65 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 158 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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