Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

36 transcription factors

AR 4 datasets

ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 130 bp overlap

ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 193 bp overlap

ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 237 bp overlap

ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 258 bp overlap

Arid3a 1 dataset

Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap

BCL6 1 dataset

Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap

BRD3 1 dataset

ChIP HEK293T GSE39579.BRD3.HEK293T 130 bp overlap

ELF3 3 datasets

ChIP PDAC GSE64557.ELF3.PDAC 423 bp overlap

ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 280 bp overlap

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 222 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 388 bp overlap

FOXA1 6 datasets

ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 184 bp overlap

ChIP LNCaP GSE64656.FOXA1.LNCaP 221 bp overlap

ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 176 bp overlap

ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 127 bp overlap

ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 162 bp overlap

ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 172 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 738 bp overlap

ChIP DE DE-FOXA2-2 786 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 615 bp overlap

ChIP DE DE-GATA4-2 641 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 374 bp overlap

GATA6 9 datasets

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap

ChIP DE DE-GATA6-1 617 bp overlap

ChIP DE DE-GATA6-2 715 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 729 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 819 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 808 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 801 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 819 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 795 bp overlap

Gfi1B 1 dataset

Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap

HOXB13 2 datasets

ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 231 bp overlap

ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 185 bp overlap

MITF 5 datasets

ChIP 501-mel GSE137522.MITF.501-mel 377 bp overlap

ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 340 bp overlap

ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 295 bp overlap

ChIP K-562 ENCSR797SWM.MITF.K-562 382 bp overlap

ChIP K562 ENCFF731XJJ 425 bp overlap

NFIA 1 dataset

Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap

PSIP1 3 datasets

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 206 bp overlap

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 228 bp overlap

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 155 bp overlap

Pgr 1 dataset

Motif DE_48h DE_48h-Pgr_MA2323.1 17 bp overlap

RBPJ 1 dataset

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

RELA 1 dataset

ChIP SW480_0h_TNFa GSE102796.RELA.SW480_0h_TNFa 70 bp overlap

Runx1 1 dataset

Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 520 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 819 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 648 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 563 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 740 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 480 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 281 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 425 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 368 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 530 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 242 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 284 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_48h DE_48h-Stat5aStat5b_MA0519.2 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 200 bp overlap

TFE3 1 dataset

ChIP K562 ENCFF697ABG 317 bp overlap

TLE3 2 datasets

ChIP LNCaP GSE94682.TLE3.LNCaP 283 bp overlap

ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 192 bp overlap

TOE1 1 dataset

ChIP HepG2 ENCFF776YJH 305 bp overlap

TP53 1 dataset

ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 128 bp overlap

USF1 2 datasets

ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 111 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 172 bp overlap

USF2 2 datasets

ChIP GM12878 GSE97661.USF2.GM12878 149 bp overlap

ChIP Hep-G2 GSE97661.USF2.Hep-G2 156 bp overlap

ZNF10 1 dataset

ChIP HEK293 ENCFF611ZJI 94 bp overlap

ZNF184 1 dataset

Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap

ZNF667 1 dataset

Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap

Gene	Dist. to TSS	Distance	Link type
PELO-AS1	1.7 kb	Proximal	Proximity
PELO	9.6 kb	Proximal	Proximity
ITGA1	9.6 kb	Proximal	Proximity

Genome Browser