chr5 : 31,551,929 – 31,552,130
201 bp 30 TFs 1 linked gene
This 201 bp open chromatin element is linked to ENSG00000279923 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000279923 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:31,546,929 – 31,557,130
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 115 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 128 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 174 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 102 bp overlap
CTCF 64 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 201 bp overlap
ChIP C4-2B ENCFF821XVN 201 bp overlap
ChIP GM23338 ENCFF531QOI 201 bp overlap
ChIP H1 ENCFF414GZI 148 bp overlap
ChIP H9 ENCFF152GTF 201 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 177 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 139 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 170 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 198 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 176 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 135 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 178 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 58 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 101 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 132 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 132 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 180 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 155 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 201 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 139 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 190 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 142 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 75 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 145 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 98 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 194 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 139 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 139 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 201 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 201 bp overlap
ChIP MCF-7 ENCFF139NQI 198 bp overlap
ChIP MCF-7 ENCFF198DQX 156 bp overlap
ChIP MCF-7 ENCFF210JUZ 201 bp overlap
ChIP MCF-7 ENCFF494VXA 156 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 181 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 175 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 140 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 139 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 127 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 106 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 201 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 201 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 175 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 201 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 125 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 181 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 163 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 201 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 103 bp overlap
ChIP VCaP ENCFF858YQT 201 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 201 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 195 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 164 bp overlap
ChIP endodermal cell ENCFF471YCZ 151 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 201 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 119 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 163 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 187 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 198 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 139 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 186 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 109 bp overlap
ESR1 12 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 152 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 130 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 177 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 179 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 177 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 164 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 159 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 149 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 160 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 167 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 166 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 153 bp overlap
ETV1 1 dataset
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 105 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 117 bp overlap
FOXA1 6 datasets
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 76 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 71 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 139 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 192 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 133 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 150 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 193 bp overlap
ChIP DE DE-FOXA2-2 201 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 110 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 201 bp overlap
ChIP DE DE-GATA4-2 201 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 144 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE DE-GATA6-2 201 bp overlap
GRHL1 2 datasets
ChIP MCF-7 GSE140185.GRHL1.MCF-7 187 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.GRHL1.MCF-7_ARID1A-KO 162 bp overlap
GRHL2 6 datasets
ChIP LNCaP GSE80256.GRHL2.LNCaP 190 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 177 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 96 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 201 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 191 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 201 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-N 123 bp overlap
HOXB13 9 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 149 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 152 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 149 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 201 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 162 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 88 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 146 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 141 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 132 bp overlap
HSF1 2 datasets
ChIP MCF-7_estrogen-1h GSE137558.HSF1.MCF-7_estrogen-1h 87 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 189 bp overlap
MED25 1 dataset
ChIP PC-3_FLAG GSE133445.MED25.PC-3_FLAG 187 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO-W505A-MORC2-mut GSE95451.MORC2.HeLa_V5-MORC2-KO-W505A-MORC2-mut 189 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 201 bp overlap
RAD21 2 datasets
ChIP MCF-7 GSE72082.RAD21.MCF-7 103 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 105 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 185 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 146 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 127 bp overlap
SMC1A 1 dataset
ChIP MCF-7 GSE115602.SMC1A.MCF-7 102 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 201 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 201 bp overlap
STAG1 4 datasets
ChIP HeLa GSE126990.STAG1.HeLa 170 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 170 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 101 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 125 bp overlap
STAT3 14 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 162 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 201 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 201 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 201 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 101 bp overlap
ChIP MCF-7_jc5846 GSE126004.STAT3.MCF-7_jc5846 119 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 128 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 80 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 166 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 178 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 192 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 201 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 201 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 201 bp overlap
SUPT5H 1 dataset
ChIP HeLa GSE125534.SUPT5H.HeLa 152 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCSR875PEI.TRIM22.MCF-7 169 bp overlap
ZNF217 2 datasets
ChIP MCF-7 ENCFF379OSU 201 bp overlap
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 164 bp overlap
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