Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

33 transcription factors

AR 1 dataset

ChIP VCaP GSE148358.AR.VCaP 91 bp overlap

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 344 bp overlap

BAF155 1 dataset

ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 160 bp overlap

BCOR 1 dataset

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 240 bp overlap

BRD4 1 dataset

ChIP HAP1 GSE108387.BRD4.HAP1 488 bp overlap

CBX8 1 dataset

ChIP K-562 ENCSR000ATW.CBX8.K-562 524 bp overlap

EP300 1 dataset

ChIP hESC GSE17917.EP300.hESC 286 bp overlap

ERG 1 dataset

ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 209 bp overlap

ETS1 1 dataset

ChIP hESC ENCSR534VHI.ETS1.hESC 125 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 121 bp overlap

FOXA2 3 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 317 bp overlap

ChIP DE DE-FOXA2-1 389 bp overlap

ChIP DE DE-FOXA2-2 284 bp overlap

GATA2 2 datasets

ChIP VCaP GSE125236.GATA2.VCaP 223 bp overlap

ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 198 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 524 bp overlap

ChIP DE DE-GATA4-2 524 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 69 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 287 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 346 bp overlap

GATA6 13 datasets

ChIP AGS GSE51705.GATA6.AGS 275 bp overlap

ChIP AGS GSE51936.GATA6.AGS 85 bp overlap

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 114 bp overlap

ChIP DE DE-GATA6-1 524 bp overlap

ChIP DE DE-GATA6-2 524 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 305 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 512 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 484 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 524 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 507 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 455 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 524 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 365 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 144 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 190 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 461 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 524 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 524 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 524 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 228 bp overlap

ChIP hESC GSE18292.NANOG.hESC 150 bp overlap

POU5F1 12 datasets

ChIP BG03 GSE21614.POU5F1.BG03 155 bp overlap

ChIP GM23338 ENCFF333SNB 99 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 508 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 416 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 278 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 454 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 298 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 326 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 524 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 424 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 299 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 305 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 158 bp overlap

RAD21 2 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 219 bp overlap

ChIP HAP1 GSE152721.RAD21.HAP1 120 bp overlap

RNF2 1 dataset

ChIP WA09 GSE105028.RNF2.WA09 274 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 496 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 524 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 385 bp overlap

SMARCA4 4 datasets

ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 94 bp overlap

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 132 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 177 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 289 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 438 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 272 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 463 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 418 bp overlap

SS18-SSX 1 dataset

ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 250 bp overlap

SUZ12 1 dataset

ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 106 bp overlap

TBP 3 datasets

ChIP hESC GSE122298.TBP.hESC 130 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 103 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 110 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 482 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 318 bp overlap

Genome Browser