chr4 : 180,598,345 180,598,799
454 bp 37 TFs 0 linked genes
This 454 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:180,593,345 – 180,603,799
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 161 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 166 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 211 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 162 bp overlap
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 301 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 278 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 285 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 214 bp overlap
ESR1 1 dataset
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 185 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 330 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 106 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 139 bp overlap
FOXA1 4 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 257 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 289 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 172 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 298 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 325 bp overlap
ChIP DE DE-FOXA2-1 308 bp overlap
ChIP DE DE-FOXA2-2 413 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 280 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 257 bp overlap
GATA2 3 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 176 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 153 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 262 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 148 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 147 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 353 bp overlap
ChIP DE DE-GATA4-2 400 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 388 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 335 bp overlap
ChIP foregut GSE117136.GATA4.foregut 321 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 454 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 373 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 318 bp overlap
ChIP DE DE-GATA6-2 454 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 329 bp overlap
ChIP foregut GSE117136.GATA6.foregut 304 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 370 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 335 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 369 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 227 bp overlap
HOXB13 1 dataset
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 187 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 243 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 183 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 201 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 281 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 216 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 191 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 291 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 191 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 242 bp overlap
NR3C1 1 dataset
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 140 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 155 bp overlap
RUNX1 3 datasets
ChIP 697 GSE138031.RUNX1.697 233 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 153 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 153 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 264 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 277 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 266 bp overlap
STAT3 2 datasets
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 245 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 200 bp overlap
TAL1 2 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 191 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 308 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 319 bp overlap
TLE3 1 dataset
ChIP LAPC-4_TFS GSE123618.TLE3.LAPC-4_TFS 232 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 389 bp overlap