chr4 : 168,565,293 168,565,645
352 bp 38 TFs 0 linked genes
This 352 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:168,560,293 – 168,570,645
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 254 bp overlap
BRD4 1 dataset
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 230 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 200 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 303 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 352 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 278 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 226 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA1 1 dataset
ChIP ZR751 GSE72249.FOXA1.ZR751 110 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 248 bp overlap
GATA2 1 dataset
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 352 bp overlap
ChIP DE DE-GATA4-2 352 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 352 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 325 bp overlap
ChIP DE DE-GATA6-2 317 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 352 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 333 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 352 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 351 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 352 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 352 bp overlap
ChIP foregut GSE117136.GATA6.foregut 287 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 247 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 172 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 307 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 77 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 210 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 94 bp overlap
NR3C1 2 datasets
ChIP IMR-90 ERP007093.NR3C1.IMR-90 140 bp overlap
ChIP MDA-MB-361 GSE152203.NR3C1.MDA-MB-361 110 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 272 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 328 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 190 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 152 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 222 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 344 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 122 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 248 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 257 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 352 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 197 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 284 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
USF1 1 dataset
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 157 bp overlap
Wt1 1 dataset
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
ZNF816 1 dataset
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap