chr1 : 75,127,900 – 75,128,460
560 bp 28 TFs 2 linked genes
This 560 bp open chromatin element is linked to LHX8-AS1 and LHX8 and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LHX8-AS1 4.1 kb Proximal Proximity
LHX8 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:75,122,900 – 75,133,460
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 225 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 189 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 305 bp overlap
CTCF 44 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 201 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 187 bp overlap
ChIP A673 ENCFF123WOM 290 bp overlap
ChIP AG09319 ENCFF401ZTN 151 bp overlap
ChIP BE2C ENCFF757SRF 254 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 175 bp overlap
ChIP C4-2B ENCFF821XVN 560 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 151 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 164 bp overlap
ChIP GM12864 ENCFF357DQE 275 bp overlap
ChIP GM23338 ENCFF772DML 131 bp overlap
ChIP H1 ENCFF230QSV 137 bp overlap
ChIP H1 ENCFF764RHO 245 bp overlap
ChIP H9 ENCFF152GTF 317 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 177 bp overlap
ChIP HFF-Myc ENCFF680WYR 234 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 242 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 117 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 129 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 97 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 187 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 186 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 124 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 474 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 137 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 300 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 195 bp overlap
ChIP K562 ENCFF082GOI 170 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 182 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 203 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 152 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 146 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 155 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 121 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 132 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 162 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 158 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 282 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 104 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 108 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 230 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 137 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 117 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 205 bp overlap
CTCFL 1 dataset
ChIP K-562 ENCSR000BNK.CTCFL.K-562 108 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 241 bp overlap
ChIP BLaER1 ENCFF364PUR 286 bp overlap
ChIP BLaER1 ENCFF896HSY 251 bp overlap
ChIP BLaER1 ENCFF896HSY 152 bp overlap
E2F6 2 datasets
ChIP WA01 ENCSR000BSI.E2F6.WA01 94 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 327 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 118 bp overlap
EZH2 14 datasets
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 186 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 560 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 542 bp overlap
ChIP astrocyte ENCFF365JTP 460 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 429 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 219 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 560 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 423 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 350 bp overlap
ChIP keratinocyte ENCFF070STK 534 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 420 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 180 bp overlap
ChIP neural progenitor cell ENCFF472NFV 144 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 300 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 560 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 164 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 150 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF4A 1 dataset
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 150 bp overlap
HSF2 1 dataset
ChIP Hep-G2 ENCSR764ZBK.HSF2.Hep-G2 174 bp overlap
JARID2 5 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 325 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 243 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 364 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 95 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 262 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 256 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 109 bp overlap
ChIP WTC11 ENCFF223QFY 320 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 154 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 120 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 309 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 271 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 339 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 208 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 174 bp overlap
RNF2 6 datasets
ChIP H1 ENCFF239FFS 445 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 267 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 228 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 390 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 560 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 355 bp overlap
RUNX1 1 dataset
ChIP K-562 ENCSR588AKU.RUNX1.K-562 114 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 126 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 132 bp overlap
SUZ12 4 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 444 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 284 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 263 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 486 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 114 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 367 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 162 bp overlap
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