chr1 : 72,770,997 72,771,745
748 bp 27 TFs 0 linked genes
This 748 bp open chromatin element has no linked target genes and is bound by 27 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:72,765,997 – 72,776,745
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 143 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 306 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 299 bp overlap
BRD4 4 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 129 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 359 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 270 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 553 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 338 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 436 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 281 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 473 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 188 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 743 bp overlap
ChIP DE DE-FOXA2-2 722 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 209 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 234 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 740 bp overlap
ChIP DE DE-GATA4-2 724 bp overlap
ChIP foregut GSE117136.GATA4.foregut 380 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 689 bp overlap
ChIP DE DE-GATA6-2 724 bp overlap
MEF2B 1 dataset
Motif DE_60h DE_60h-MEF2B_MA0660.1 12 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 342 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 234 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 449 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 434 bp overlap
NRL 1 dataset
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 464 bp overlap
POU2F1 1 dataset
ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 67 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 301 bp overlap
RUNX3 1 dataset
Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap
SMARCE1 1 dataset
ChIP HMLE-Twist-ER_125nM_4OHT GSE96933.SMARCE1.HMLE-Twist-ER_125nM_4OHT 156 bp overlap
SPI1 1 dataset
ChIP EM-3 GSE128834.SPI1.EM-3 132 bp overlap
ZKSCAN2 1 dataset
ChIP HEK293T GSE78099.ZKSCAN2.HEK293T 222 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 119 bp overlap
ZNF558 1 dataset
ChIP HEK293T GSE78099.ZNF558.HEK293T 258 bp overlap