chr4 : 23,629,225 23,629,925
700 bp 44 TFs 0 linked genes
This 700 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:23,624,225 – 23,634,925
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap
CEBPG 1 dataset
Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap
CTCF 2 datasets
Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap
Motif DE_48h DE_48h-CTCF_MA1930.2 33 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 251 bp overlap
DMRTC2 1 dataset
Motif DE_48h DE_48h-DMRTC2_MA1479.2 11 bp overlap
DUX4 1 dataset
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Dux 1 dataset
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
EHF 1 dataset
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 294 bp overlap
ELK4 1 dataset
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 375 bp overlap
ETV1 1 dataset
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 500 bp overlap
ChIP DE DE-FOXA2-2 419 bp overlap
GABPA 1 dataset
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 700 bp overlap
ChIP DE DE-GATA4-2 611 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 653 bp overlap
ChIP DE DE-GATA6-2 594 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 613 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 700 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 676 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 700 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 328 bp overlap
Ikzf3 1 dataset
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
JUN 5 datasets
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 261 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 349 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 433 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 495 bp overlap
MYB 1 dataset
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
NFYA 1 dataset
Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 114 bp overlap
PLAGL2 1 dataset
Motif DE_48h DE_48h-PLAGL2_MA1548.2 8 bp overlap
RARA 1 dataset
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 373 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 583 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 441 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 330 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 375 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 278 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 437 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 326 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 311 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 373 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 461 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Stat2 1 dataset
Motif DE_48h DE_48h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
VEZF1 1 dataset
Motif DE_48h DE_48h-VEZF1_MA1578.2 6 bp overlap
Wt1 1 dataset
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
ZNF189 1 dataset
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
ZNF341 1 dataset
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
ZNF582 2 datasets
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
ZNF677 1 dataset
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
ZNF701 1 dataset
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap