chr4 : 10,114,692 10,114,916
224 bp 35 TFs 3 linked genes
This 224 bp open chromatin element is linked to RNA5SP155, WDR1, and ENSG00000289865 and is bound by 35 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
RNA5SP155 967 bp At TSS Proximity
WDR1 1.9 kb Proximal Proximity
ENSG00000289865 2.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:10,109,692 – 10,119,916
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 109 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 224 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 224 bp overlap
BCL6 5 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 209 bp overlap
ChIP CD4 GSE59933.BCL6.CD4 223 bp overlap
ChIP HepG2 ENCFF423EJH 189 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 185 bp overlap
ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 224 bp overlap
BRD4 2 datasets
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 184 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 224 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 105 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 172 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 109 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 224 bp overlap
EGR1 3 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 160 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 117 bp overlap
ChIP K562 ENCFF006PJY 224 bp overlap
EP300 1 dataset
ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.EP300.pulmonary-artery_endothelial-cell_siPFKFB3 103 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 194 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 214 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 156 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 105 bp overlap
FUBP3 1 dataset
ChIP HepG2 ENCFF281RQN 131 bp overlap
GATA6 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 132 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 220 bp overlap
HOXA5 1 dataset
ChIP HepG2 ENCFF580MCT 93 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 224 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 224 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 207 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 52 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 123 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 190 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 66 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 224 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 84 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 176 bp overlap
POLR2A 7 datasets
ChIP GM12878 ENCFF521FXC 139 bp overlap
ChIP GM12878 ENCFF521FXC 93 bp overlap
ChIP GM12878 ENCFF631ERR 184 bp overlap
ChIP HCT116 ENCFF508RDJ 224 bp overlap
ChIP K562 ENCFF137JSF 103 bp overlap
ChIP K562 ENCFF215CWW 156 bp overlap
ChIP K562 ENCFF514URW 122 bp overlap
RBFOX2 3 datasets
ChIP HepG2 ENCFF554DMZ 116 bp overlap
ChIP K562 ENCFF196WTG 224 bp overlap
ChIP K562 ENCFF967GRF 224 bp overlap
RBM39 2 datasets
ChIP K-562 ENCSR764OXF.RBM39.K-562 165 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 164 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 145 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 224 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 224 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 88 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 202 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 197 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 224 bp overlap
ZBTB14 1 dataset
ChIP HepG2 ENCFF570VWN 83 bp overlap