chr4 : 2,271,300 2,271,520
220 bp 32 TFs 1 linked gene
This 220 bp open chromatin element is linked to MXD4 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MXD4 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:2,266,300 – 2,276,520
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 167 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 220 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 177 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 220 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 220 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 220 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 220 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 136 bp overlap
ERG 1 dataset
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 179 bp overlap
ESR1 1 dataset
ChIP Ishikawa GSE99905.ESR1.Ishikawa 151 bp overlap
EZH2 1 dataset
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 203 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 129 bp overlap
GLIS2 3 datasets
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 220 bp overlap
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 51 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 220 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 220 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 217 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 113 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 109 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 102 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 210 bp overlap
NFIB 1 dataset
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 155 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 220 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 220 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 220 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 136 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 105 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 147 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 220 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 220 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 220 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 220 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 220 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 220 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 220 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 220 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 193 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 205 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 161 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 147 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 220 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 128 bp overlap