chr3 : 162,984,838 162,985,050
212 bp 27 TFs 0 linked genes
This 212 bp open chromatin element has no linked target genes and is bound by 27 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:162,979,838 – 162,990,050
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BRD2 5 datasets
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 94 bp overlap
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 62 bp overlap
ChIP SUM159PT_JQ1_MGSK2801 GSE116879.BRD2.SUM159PT_JQ1_MGSK2801 127 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 212 bp overlap
ChIP SUM159PT_R_JQ1 GSE131097.BRD2.SUM159PT_R_JQ1 113 bp overlap
BRD4 4 datasets
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 161 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 135 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 95 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 212 bp overlap
BRD7 1 dataset
ChIP SUM159PT_DMSO GSE131097.BRD7.SUM159PT_DMSO 170 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
E2F6 1 dataset
ChIP HeLa-S3 ENCSR000EVK.E2F6.HeLa-S3 179 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 106 bp overlap
FOXA2 1 dataset
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 70 bp overlap
GATA1 1 dataset
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 131 bp overlap
GATA6 1 dataset
ChIP AGS GSE51936.GATA6.AGS 79 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 164 bp overlap
MAX 3 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 179 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 190 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 182 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYC 2 datasets
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 174 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 208 bp overlap
MZF1 1 dataset
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 158 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
POLR2A 1 dataset
ChIP HeLa-S3 ENCFF773DNG 212 bp overlap
RAD21 1 dataset
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 111 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
TBP 1 dataset
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 133 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 153 bp overlap