Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

41 transcription factors

BCL11A 1 dataset

Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 129 bp overlap

FOXA1 1 dataset

ChIP MCF-7 ENCFF465LTH 110 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 372 bp overlap

ChIP DE DE-FOXA2-2 315 bp overlap

FOXB1 1 dataset

Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 212 bp overlap

ChIP DE DE-GATA4-2 215 bp overlap

GATA6 6 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 214 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 309 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 284 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 374 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 318 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 321 bp overlap

Hand1 1 dataset

Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap

IRF8 1 dataset

ChIP THP-1 GSE123872.IRF8.THP-1 296 bp overlap

IRF9 1 dataset

Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap

KLF3 1 dataset

Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap

KLF9 1 dataset

Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 282 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 205 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 290 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 248 bp overlap

NFIC 1 dataset

ChIP GM12878 ENCFF259FWL 83 bp overlap

NRL 1 dataset

Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 202 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU4F2 1 dataset

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

POU5F1 2 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 245 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RORA 1 dataset

Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 155 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 203 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 163 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 159 bp overlap

SPI1 6 datasets

ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 203 bp overlap

ChIP EM-3 GSE128834.SPI1.EM-3 165 bp overlap

ChIP GM12891 ENCFF563IUT 193 bp overlap

ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 196 bp overlap

ChIP THP-1 GSE128834.SPI1.THP-1 182 bp overlap

ChIP monocyte GSE31621.SPI1.monocyte 158 bp overlap

STAT1::STAT2 1 dataset

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

STAT3 1 dataset

ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 127 bp overlap

Spz1 1 dataset

Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap

Stat2 1 dataset

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

TRIM24 1 dataset

ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 276 bp overlap

Znf423 1 dataset

Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap

Genome Browser