Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 170 bp overlap

BRD4 3 datasets

ChIP RH4 GSE83726.BRD4.RH4 626 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 231 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 558 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 152 bp overlap

CHD4 2 datasets

ChIP RH5 GSE155861.CHD4.RH5 151 bp overlap

ChIP SCMC GSE155861.CHD4.SCMC 626 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 181 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 68 bp overlap

ChIP BLaER1 ENCFF364PUR 120 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 256 bp overlap

ETV1 1 dataset

ChIP COLO-800 GSE80443.ETV1.COLO-800 252 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 441 bp overlap

ChIP DE DE-FOXA2-2 401 bp overlap

FOXO1-PAX3 2 datasets

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 442 bp overlap

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 212 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 487 bp overlap

ChIP DE DE-GATA4-2 626 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 626 bp overlap

ChIP DE DE-GATA6-2 626 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 626 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 547 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 626 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 503 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 626 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 626 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 485 bp overlap

HDAC2 2 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 505 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 624 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 564 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 431 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 268 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 413 bp overlap

MED1 1 dataset

ChIP RH4 GSE83726.MED1.RH4 332 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 423 bp overlap

MYCN 1 dataset

ChIP RH4 GSE83726.MYCN.RH4 155 bp overlap

MYOD1 6 datasets

ChIP RD GSE137168.MYOD1.RD 172 bp overlap

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 626 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 626 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 181 bp overlap

ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 290 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 189 bp overlap

MYOG 3 datasets

ChIP RH4 GSE83726.MYOG.RH4 435 bp overlap

ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 323 bp overlap

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 185 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 102 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 455 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 58 bp overlap

NUTM1 2 datasets

ChIP NMC24335 GSE96775.NUTM1.NMC24335 487 bp overlap

ChIP NMC24335 GSE96775.NUTM1.NMC24335 82 bp overlap

RBBP4 2 datasets

ChIP RH5 GSE155861.RBBP4.RH5 448 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 535 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 311 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 626 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 626 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 626 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 626 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 626 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 626 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 626 bp overlap

SMARCA4 5 datasets

ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 209 bp overlap

ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 218 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 626 bp overlap

ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 464 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 626 bp overlap

SMARCC1 6 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 372 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 352 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 144 bp overlap

ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 465 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 497 bp overlap

ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 532 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 208 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 317 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 343 bp overlap

SOX8 3 datasets

ChIP RH4 GSE116344.SOX8.RH4 462 bp overlap

ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 258 bp overlap

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 272 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 616 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 223 bp overlap

ZNF532 1 dataset

ChIP NMC24335 GSE96775.ZNF532.NMC24335 259 bp overlap

Genome Browser