chr3 : 42,877,029 42,877,407
378 bp 43 TFs 0 linked genes
This 378 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:42,872,029 – 42,882,407
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 154 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 138 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 351 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 378 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 296 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 133 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 378 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 140 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 154 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 189 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 183 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 341 bp overlap
ChIP DE DE-GATA4-2 372 bp overlap
ChIP foregut GSE117136.GATA4.foregut 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 222 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 378 bp overlap
ChIP DE DE-GATA6-2 318 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 241 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap
ChIP foregut GSE117136.GATA6.foregut 378 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 230 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 378 bp overlap
HNF1A 5 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 378 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 378 bp overlap
ChIP Hep-G2 ENCSR800QIT.HNF1A.Hep-G2 238 bp overlap
ChIP HepG2 ENCFF352VYI 278 bp overlap
ChIP HepG2 ENCFF540TRC 350 bp overlap
HNF1B 4 datasets
ChIP H9 ERP004206.HNF1B.H9 229 bp overlap
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 195 bp overlap
ChIP HepG2 ENCFF928THX 276 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 378 bp overlap
HNF4A 2 datasets
ChIP HepG2 ENCFF146SSF 328 bp overlap
ChIP liver ENCFF354NRH 87 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 161 bp overlap
MAX 5 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 176 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 170 bp overlap
ChIP HepG2 ENCFF479OHI 143 bp overlap
ChIP HepG2 ENCFF479OHI 378 bp overlap
ChIP HepG2 ENCFF507HCX 378 bp overlap
MED1 1 dataset
ChIP HepG2 ENCFF495TSS 308 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 184 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 206 bp overlap
ChIP HepG2 ENCFF057YJE 378 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 236 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 167 bp overlap
PRDM10 4 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 378 bp overlap
ChIP HepG2 ENCFF324FNA 378 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 206 bp overlap
ChIP K562 ENCFF740YLK 320 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 361 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 276 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 106 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 335 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 342 bp overlap
TAL1 6 datasets
ChIP K-562 GSE107726.TAL1.K-562 206 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 141 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 153 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 176 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 175 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 358 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 118 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 152 bp overlap
ZBTB7B 2 datasets
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 271 bp overlap
ChIP HepG2 ENCFF763OCV 302 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 378 bp overlap
ZFY 2 datasets
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 195 bp overlap
ChIP HepG2 ENCFF106ELT 378 bp overlap
ZHX1 1 dataset
ChIP HepG2 ENCFF051FGD 370 bp overlap
ZNF34 1 dataset
ChIP HepG2 ENCFF739BBD 68 bp overlap
ZNF598 2 datasets
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 291 bp overlap
ChIP HepG2 ENCFF356UIO 314 bp overlap
ZNF609 1 dataset
ChIP HepG2 ENCFF900FRP 152 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 298 bp overlap