chr2 : 233,702,363 233,702,813
450 bp 66 TFs 0 linked genes
This 450 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:233,697,363 – 233,707,813
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 141 bp overlap
BARX1 1 dataset
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
BRD4 7 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 188 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 450 bp overlap
ChIP SUM159PT_DMSO GSE131097.BRD4.SUM159PT_DMSO 158 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 244 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 450 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 450 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 450 bp overlap
BSX 1 dataset
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
CDX2 1 dataset
Motif DE_48h DE_48h-CDX2_MA0465.3 8 bp overlap
DLX1 1 dataset
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 450 bp overlap
EP300 3 datasets
ChIP HeLa-S3 ENCFF245KNK 281 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 220 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 196 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 134 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 293 bp overlap
ChIP DE DE-FOXA2-1 450 bp overlap
ChIP DE DE-FOXA2-2 450 bp overlap
FOXD3 1 dataset
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
GATA1 7 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 224 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 188 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 328 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 149 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 368 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 206 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 247 bp overlap
GATA2 10 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 175 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 291 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 234 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 222 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 154 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 299 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 206 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 281 bp overlap
GATA3 8 datasets
ChIP Jurkat GSE120063.GATA3.Jurkat 335 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 270 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 170 bp overlap
ChIP SH-SY5Y ENCFF475HYF 438 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 279 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 220 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 178 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 226 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 450 bp overlap
ChIP DE DE-GATA4-2 450 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 224 bp overlap
ChIP foregut GSE117136.GATA4.foregut 261 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 322 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 300 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 264 bp overlap
ChIP DE DE-GATA6-1 450 bp overlap
ChIP DE DE-GATA6-2 450 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 319 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 450 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 293 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 189 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 426 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 274 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 450 bp overlap
GBX2 1 dataset
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
HESX1 1 dataset
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 213 bp overlap
HOXA6 1 dataset
Motif DE_48h DE_48h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif DE_48h DE_48h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_48h DE_48h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_48h DE_48h-HOXB8_MA1502.2 7 bp overlap
HOXD3 1 dataset
Motif DE_48h DE_48h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_48h DE_48h-HOXD8_MA0910.3 7 bp overlap
LBX2 1 dataset
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 73 bp overlap
MSX1 1 dataset
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
Mecom 1 dataset
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Msx3 1 dataset
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
NFATC3 1 dataset
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
NFE2L2 2 datasets
ChIP HeLa-S3 ENCFF449JDM 233 bp overlap
ChIP HeLa-S3 ENCSR707IUN.NFE2L2.HeLa-S3 179 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 450 bp overlap
Nfatc1 1 dataset
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_48h DE_48h-Nfatc2_MA0152.3 8 bp overlap
Nobox 1 dataset
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
PHOX2A 1 dataset
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
POU1F1 1 dataset
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
Pgr 1 dataset
Motif DE_48h DE_48h-Pgr_MA2323.1 17 bp overlap
RAX 1 dataset
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
Rarg 1 dataset
Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap
SATB1 1 dataset
Motif DE_48h DE_48h-SATB1_MA1963.2 7 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 421 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 401 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 391 bp overlap
THAP1 1 dataset
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
TRPS1 3 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
ChIP MCF-7 GSE133072.TRPS1.MCF-7 165 bp overlap
ZIM3 1 dataset
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
ZNF184 1 dataset
Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap
ZNF257 1 dataset
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
ZNF354A 1 dataset
Motif DE_48h DE_48h-ZNF354A_MA1978.2 20 bp overlap
ZNF558 2 datasets
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
ZSCAN31 1 dataset
Motif DE_48h DE_48h-ZSCAN31_MA1722.2 18 bp overlap