chr2 : 222,300,991 222,301,195
204 bp 29 TFs 1 linked gene
This 204 bp open chromatin element is linked to PAX3 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PAX3 2.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:222,295,991 – 222,306,195
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 135 bp overlap
BCOR 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 136 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 204 bp overlap
BRD2 1 dataset
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 190 bp overlap
BRD4 1 dataset
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 114 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 192 bp overlap
ChIP H1 ENCFF095JHA 204 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 204 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 204 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 204 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 105 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 204 bp overlap
EZH2 24 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 204 bp overlap
ChIP GM12878 ENCFF635TDF 204 bp overlap
ChIP GM23248 ENCFF404ZHM 204 bp overlap
ChIP GM23248 ENCFF404ZHM 187 bp overlap
ChIP GM23338 ENCFF613YON 204 bp overlap
ChIP GM23338 ENCFF886DXX 204 bp overlap
ChIP H1 ENCFF232NZA 204 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 204 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 176 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 148 bp overlap
ChIP SK-N-SH ENCFF657FZK 139 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 204 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 204 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 140 bp overlap
ChIP fibroblast of lung ENCFF479BAW 143 bp overlap
ChIP fibroblast of lung ENCFF479BAW 204 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 204 bp overlap
ChIP hepatocyte ENCFF118DKH 93 bp overlap
ChIP hepatocyte ENCFF118DKH 62 bp overlap
ChIP hepatocyte ENCFF552DZB 204 bp overlap
ChIP keratinocyte ENCFF070STK 152 bp overlap
ChIP keratinocyte ENCFF070STK 118 bp overlap
ChIP neural progenitor cell ENCFF018MKA 204 bp overlap
ChIP neural progenitor cell ENCFF472NFV 204 bp overlap
GATA6 2 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 121 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 159 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 193 bp overlap
JUN 2 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 51 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 204 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 160 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 204 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 204 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 189 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 204 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 204 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 204 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 204 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 204 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 196 bp overlap
SMARCA4 1 dataset
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 151 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 204 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 204 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 112 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 78 bp overlap
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 204 bp overlap
SUZ12 7 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 204 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 154 bp overlap
ChIP H1 ENCFF881NFR 204 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 112 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 204 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 116 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 204 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 162 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 70 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 204 bp overlap