chr2 : 210,364,658 – 210,365,757
1,099 bp 62 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 62 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:210,359,658 – 210,370,757
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
BARX2 2 datasets
Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
CTCFL 1 dataset
Motif DE_36h DE_36h-CTCFL_MA1102.3 8 bp overlap
DUX4 2 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
ELF1 1 dataset
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
ERF::FOXI1 1 dataset
Motif DE_36h DE_36h-ERFFOXI1_MA1935.2 10 bp overlap
ESRRA 2 datasets
Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap
Motif DE_48h DE_48h-ESRRA_MA0592.4 9 bp overlap
ESRRB 2 datasets
Motif DE_36h DE_36h-ESRRB_MA0141.4 10 bp overlap
Motif DE_48h DE_48h-ESRRB_MA0141.4 10 bp overlap
ETV1 1 dataset
Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::DRGX 2 datasets
Motif DE_36h DE_36h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_48h DE_48h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::HOXA2 4 datasets
Motif DE_36h DE_36h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif DE_36h DE_36h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif DE_48h DE_48h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif DE_48h DE_48h-ETV5HOXA2_MA1948.2 12 bp overlap
Erg 1 dataset
Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap
FLI1::DRGX 2 datasets
Motif DE_36h DE_36h-FLI1DRGX_MA1949.2 14 bp overlap
Motif DE_48h DE_48h-FLI1DRGX_MA1949.2 14 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
FOS 2 datasets
ChIP MCF-7 ENCFF282FWZ 205 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 233 bp overlap
FOSL1 2 datasets
ChIP HCT116 ENCFF540ZXN 284 bp overlap
ChIP HCT116 ENCFF540ZXN 85 bp overlap
FOXB1 2 datasets
Motif DE_36h DE_36h-FOXB1_MA0845.1 11 bp overlap
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
Foxl2 2 datasets
Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
GABPA 1 dataset
Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 495 bp overlap
ChIP DE DE-GATA4-2 585 bp overlap
ChIP DE DE-GATA4-2 200 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 363 bp overlap
ChIP DE DE-GATA6-2 589 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 360 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 419 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 345 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 630 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 323 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 324 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
Irf1 2 datasets
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 622 bp overlap
LIN54 2 datasets
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
Motif DE_48h DE_48h-LIN54_MA0619.2 7 bp overlap
Msgn1 2 datasets
Motif DE_36h DE_36h-Msgn1_MA1524.3 10 bp overlap
Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 234 bp overlap
NFATC3 2 datasets
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
NR2C1 2 datasets
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
NR5A1 2 datasets
Motif DE_36h DE_36h-NR5A1_MA1540.3 12 bp overlap
Motif DE_48h DE_48h-NR5A1_MA1540.3 12 bp overlap
Nanog 2 datasets
Motif DE_36h DE_36h-Nanog_MA2339.1 7 bp overlap
Motif DE_48h DE_48h-Nanog_MA2339.1 7 bp overlap
Nfatc1 2 datasets
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Nr1H2 2 datasets
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
Nr2e1 2 datasets
Motif DE_36h DE_36h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
Nr5A2 2 datasets
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 141 bp overlap
RARA::RXRG 2 datasets
Motif DE_36h DE_36h-RARARXRG_MA1149.2 17 bp overlap
Motif DE_48h DE_48h-RARARXRG_MA1149.2 17 bp overlap
RORB 2 datasets
Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap
Motif DE_48h DE_48h-RORB_MA1150.2 10 bp overlap
Rarg 2 datasets
Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap
Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 609 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 484 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 456 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 483 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 560 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 448 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 766 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 748 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 313 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 360 bp overlap
SP5 2 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
TBX18 2 datasets
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
THAP1 2 datasets
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
THRA 2 datasets
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
Motif DE_48h DE_48h-THRA_MA1969.2 18 bp overlap
THRB 2 datasets
Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
USF1 2 datasets
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 186 bp overlap
ChIP HCT116 ENCFF330PYP 284 bp overlap
ZBTB7A 1 dataset
Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap
ZNF175 1 dataset
Motif DE_36h DE_36h-ZNF175_MA2332.1 9 bp overlap
ZNF184 2 datasets
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap
ZNF324 2 datasets
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap
ZNF558 2 datasets
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
ZNF784 2 datasets
Motif DE_36h DE_36h-ZNF784_MA1717.2 8 bp overlap
Motif DE_48h DE_48h-ZNF784_MA1717.2 8 bp overlap
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