chr2 : 192,940,610 192,941,264
654 bp 56 TFs 0 linked genes
This 654 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:192,935,610 – 192,946,264
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
Arid5a 1 dataset
Motif DE_12h DE_12h-Arid5a_MA0602.2 8 bp overlap
CTCF 144 datasets
ChIP 22Rv1 ENCFF466OXN 654 bp overlap
ChIP 22Rv1 ENCFF466OXN 458 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 363 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 436 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 223 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 213 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 361 bp overlap
ChIP A673 ENCFF123WOM 441 bp overlap
ChIP A673 ENCFF123WOM 292 bp overlap
ChIP C4-2B ENCFF821XVN 319 bp overlap
ChIP C4-2B ENCFF821XVN 478 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 102 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 167 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 230 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 167 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 192 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 160 bp overlap
ChIP GM12865 ENCFF067GFI 257 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 120 bp overlap
ChIP GM23338 ENCFF531QOI 218 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF764RHO 121 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP H9 ENCFF152GTF 213 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 202 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 208 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 174 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 235 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 213 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 223 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 164 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 377 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 184 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 205 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 184 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 124 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 66 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 119 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 254 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 226 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 195 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 135 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 163 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 174 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 134 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 93 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 98 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 153 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 149 bp overlap
ChIP LNCAP ENCFF223HIG 521 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 239 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 579 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 288 bp overlap
ChIP Loucy ENCFF359TVQ 465 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 217 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 212 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 309 bp overlap
ChIP MCF-7 ENCFF139NQI 277 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 65 bp overlap
ChIP MCF-7 ENCFF210JUZ 421 bp overlap
ChIP MCF-7 ENCFF494VXA 65 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 275 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 261 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 230 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 170 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 144 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 123 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 138 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 381 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 291 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 276 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 333 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 274 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 253 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 311 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 129 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 116 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 517 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 329 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 308 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 222 bp overlap
ChIP PC-3 ENCFF487TUI 485 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 340 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 413 bp overlap
ChIP RWPE2 ENCFF911IEE 654 bp overlap
ChIP RWPE2 ENCFF911IEE 464 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 119 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 219 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 172 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 201 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 240 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 263 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 265 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 216 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 336 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 220 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 198 bp overlap
ChIP VCaP ENCFF858YQT 283 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 492 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 141 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 214 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 122 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 159 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 271 bp overlap
ChIP endodermal cell ENCFF471YCZ 275 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 305 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 313 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 151 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 203 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 110 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 384 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 272 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 144 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 177 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCFF667ULX 325 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 510 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 156 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 173 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 297 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 276 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 325 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 224 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 265 bp overlap
ChIP neural progenitor cell ENCFF420RBO 411 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 271 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 214 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 148 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 182 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 437 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 586 bp overlap
Dux 2 datasets
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 231 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 211 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 233 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 223 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 228 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 233 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 180 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 169 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 186 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 226 bp overlap
ESR2 2 datasets
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
Motif ES_0h ES_0h-ESR2_MA0258.2 15 bp overlap
ESRRB 2 datasets
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif ES_0h ES_0h-ESRRB_MA0141.4 10 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Esrrg 2 datasets
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
Motif ES_0h ES_0h-Esrrg_MA0643.2 9 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
HMBOX1 1 dataset
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Isl1 2 datasets
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
NR2C1 2 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
NR2F2 2 datasets
Motif DE_12h DE_12h-NR2F2_MA1111.2 7 bp overlap
Motif ES_0h ES_0h-NR2F2_MA1111.2 7 bp overlap
NR4A1 2 datasets
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
NR4A2 2 datasets
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
Motif ES_0h ES_0h-NR4A2_MA0160.3 8 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Pgr 2 datasets
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
Ppara 2 datasets
Motif DE_12h DE_12h-Ppara_MA2338.1 7 bp overlap
Motif ES_0h ES_0h-Ppara_MA2338.1 7 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP MCF-7 ENCFF724VCQ 257 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 214 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 181 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 131 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 111 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap
SCRT2 2 datasets
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
Motif ES_0h ES_0h-SCRT2_MA0744.3 10 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 145 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 164 bp overlap
TAL1 2 datasets
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 107 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 185 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap
Motif ES_0h ES_0h-THRB_MA1575.2 17 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 149 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZSCAN21 2 datasets
Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap
Motif ES_0h ES_0h-ZSCAN21_MA2336.1 7 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap