chr2 : 154,848,713 – 154,849,750

1,037 bp 66 TFs 0 linked genes

This 1.0 kb open chromatin element has no linked target genes and is bound by 66 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

Atf3 1 dataset

Motif DE_36h DE_36h-Atf3_MA1988.2 7 bp overlap

BACH1 1 dataset

Motif DE_36h DE_36h-BACH1_MA1633.2 9 bp overlap

BATF 1 dataset

Motif DE_36h DE_36h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_36h DE_36h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_36h DE_36h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif DE_36h DE_36h-BNC2_MA1928.2 7 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 260 bp overlap

CTCF 2 datasets

ChIP MCF-7 ENCFF198DQX 231 bp overlap

ChIP MCF-7 ENCFF494VXA 231 bp overlap

DUX4 1 dataset

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Dmrt1 1 dataset

Motif DE_36h DE_36h-Dmrt1_MA1603.2 9 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 306 bp overlap

ChIP hESC GSE26097.EOMES.hESC 174 bp overlap

ERG 1 dataset

ChIP Jurkat GSE49091.ERG.Jurkat 126 bp overlap

EZH2 1 dataset

ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 122 bp overlap

FOS 1 dataset

Motif DE_36h DE_36h-FOS_MA0476.2 8 bp overlap

FOS::JUN 1 dataset

Motif DE_36h DE_36h-FOSJUN_MA0099.4 9 bp overlap

FOS::JUNB 1 dataset

Motif DE_36h DE_36h-FOSJUNB_MA1134.2 9 bp overlap

FOS::JUND 1 dataset

Motif DE_36h DE_36h-FOSJUND_MA1141.2 9 bp overlap

FOSB::JUNB 1 dataset

Motif DE_36h DE_36h-FOSBJUNB_MA1135.2 9 bp overlap

FOSL1 1 dataset

Motif DE_36h DE_36h-FOSL1_MA0477.3 9 bp overlap

FOSL1::JUN 1 dataset

Motif DE_36h DE_36h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUNB 1 dataset

Motif DE_36h DE_36h-FOSL1JUNB_MA1137.2 9 bp overlap

FOSL1::JUND 1 dataset

Motif DE_36h DE_36h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2 1 dataset

Motif DE_36h DE_36h-FOSL2_MA0478.2 10 bp overlap

FOSL2::JUN 1 dataset

Motif DE_36h DE_36h-FOSL2JUN_MA1130.2 9 bp overlap

FOSL2::JUNB 1 dataset

Motif DE_36h DE_36h-FOSL2JUNB_MA1138.2 9 bp overlap

FOSL2::JUND 1 dataset

Motif DE_36h DE_36h-FOSL2JUND_MA1144.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 1037 bp overlap

ChIP DE DE-FOXA2-2 1037 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 929 bp overlap

ChIP DE DE-GATA4-2 986 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 232 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 962 bp overlap

ChIP DE DE-GATA6-2 982 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 930 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 951 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 545 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 576 bp overlap

GFI1B 1 dataset

ChIP SET-2 GSE121424.GFI1B.SET-2 258 bp overlap

HNRNPK 2 datasets

ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 187 bp overlap

ChIP HepG2 ENCFF493GNS 511 bp overlap

JUN::JUNB 1 dataset

Motif DE_36h DE_36h-JUNJUNB_MA1132.2 8 bp overlap

JUNB 1 dataset

Motif DE_36h DE_36h-JUNB_MA0490.3 9 bp overlap

JUND 1 dataset

Motif DE_36h DE_36h-JUND_MA0491.3 9 bp overlap

Jun 1 dataset

Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap

KDM1A 4 datasets

ChIP K-562 GSE117944.KDM1A.K-562 248 bp overlap

ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 172 bp overlap

ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 231 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 111 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_36h DE_36h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap

MEIS1 2 datasets

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

Mecom 2 datasets

Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap

NFATC3 1 dataset

Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap

NFATC4 1 dataset

Motif DE_36h DE_36h-NFATC4_MA1525.3 9 bp overlap

Nfatc1 1 dataset

Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap

ONECUT1 3 datasets

ChIP H9 ERP004206.ONECUT1.H9 315 bp overlap

ChIP liver ERP002306.ONECUT1.liver 184 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 424 bp overlap

PAX6 1 dataset

Motif DE_36h DE_36h-PAX6_MA0069.1 14 bp overlap

PBX3 1 dataset

Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 176 bp overlap

PKNOX1 1 dataset

Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 169 bp overlap

RORA 1 dataset

Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap

Rhox11 1 dataset

Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 480 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 286 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 290 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 200 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 375 bp overlap

STAG1 1 dataset

ChIP MCF-7 ERP000209.STAG1.MCF-7 153 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 195 bp overlap

Spz1 1 dataset

Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 285 bp overlap

TFAP2E 1 dataset

Motif DE_60h DE_60h-TFAP2E_MA1569.2 9 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 203 bp overlap

ZNF274 1 dataset

Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap

ZNF454 2 datasets

Motif DE_36h DE_36h-ZNF454_MA1712.2 17 bp overlap

Motif DE_60h DE_60h-ZNF454_MA1712.2 17 bp overlap

ZNF558 1 dataset

Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap

ZSCAN16 1 dataset

Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap

ZSCAN29 1 dataset

Motif DE_36h DE_36h-ZSCAN29_MA1602.2 11 bp overlap