chr2 : 136,127,705 – 136,128,180
475 bp 27 TFs 2 linked genes
This 475 bp open chromatin element is linked to ENSG00000289974 and CXCR4 and is bound by 27 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289974 8.2 kb Proximal Proximity
CXCR4 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:136,122,705 – 136,133,180
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 165 bp overlap
BRD4 6 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 234 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 326 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 375 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 475 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 280 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 94 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 246 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 183 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 318 bp overlap
ChIP DE DE-FOXA2-2 311 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 52 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 371 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 358 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 281 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 53 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 341 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 351 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 252 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 272 bp overlap
NFKB1 2 datasets
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 61 bp overlap
ChIP L1236 GSE63736.NFKB1.L1236 96 bp overlap
NR3C1 2 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 52 bp overlap
ChIP NALM-6 GSE67046.NR3C1.NALM-6 277 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 281 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 183 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 181 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 99 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 187 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 178 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 400 bp overlap
SMARCA4 2 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 142 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 203 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 473 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 192 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 65 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 177 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 247 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 238 bp overlap
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