Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

48 transcription factors

ARNT 1 dataset

ChIP A-549 GSE85352.ARNT.A-549 335 bp overlap

BARX1 1 dataset

Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap

BSX 1 dataset

Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap

DLX1 1 dataset

Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap

EN2 1 dataset

Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap

ESR1 1 dataset

ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 352 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 323 bp overlap

ChIP DE DE-FOXA2-2 346 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 416 bp overlap

ChIP DE DE-GATA4-2 455 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 366 bp overlap

ChIP DE DE-GATA6-2 456 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 520 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 539 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 616 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 383 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 616 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 616 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 288 bp overlap

GBX1 1 dataset

Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap

IKZF1 1 dataset

ChIP K-562 ENCSR395HWC.IKZF1.K-562 119 bp overlap

IRF4 1 dataset

ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap

JUN 2 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 274 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 299 bp overlap

LBX1 1 dataset

Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap

MSX1 1 dataset

Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap

NR3C1 1 dataset

ChIP THP-1_Dex GSE99887.NR3C1.THP-1_Dex 205 bp overlap

Nobox 1 dataset

Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap

PRRX2 1 dataset

Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap

RAX 1 dataset

Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap

RORB 1 dataset

Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap

RORC 1 dataset

Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap

RUNX1 1 dataset

ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 178 bp overlap

SMAD2-3 3 datasets

ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 472 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 311 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 356 bp overlap

SMARCA4 2 datasets

ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 120 bp overlap

ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 118 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 245 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 416 bp overlap

SPI1 27 datasets

ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 162 bp overlap

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 212 bp overlap

ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 200 bp overlap

ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 158 bp overlap

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 214 bp overlap

ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 182 bp overlap

ChIP DC_LPS GSE123347.SPI1.DC_LPS 123 bp overlap

ChIP EM-3 GSE128834.SPI1.EM-3 168 bp overlap

ChIP GM12878 ENCFF134LCP 208 bp overlap

ChIP GM12891 ENCFF563IUT 187 bp overlap

ChIP HL-60 ENCFF645GBT 198 bp overlap

ChIP K-562 GSE70482.SPI1.K-562 165 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 141 bp overlap

ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 130 bp overlap

ChIP K562 ENCFF410ORC 180 bp overlap

ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 239 bp overlap

ChIP NB4 GSE128834.SPI1.NB4 152 bp overlap

ChIP THP-1 GSE128834.SPI1.THP-1 83 bp overlap

ChIP U-937 GSE128834.SPI1.U-937 160 bp overlap

ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 65 bp overlap

ChIP monocyte GSE31621.SPI1.monocyte 171 bp overlap

ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 157 bp overlap

ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 165 bp overlap

ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 356 bp overlap

ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 94 bp overlap

ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 97 bp overlap

ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 145 bp overlap

SPIB 1 dataset

ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 175 bp overlap

SREBP2 2 datasets

ChIP monocyte GSE129202.SREBP2.monocyte 84 bp overlap

ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 296 bp overlap

STAT1 3 datasets

ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 86 bp overlap

ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 172 bp overlap

ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 70 bp overlap

STAT3 1 dataset

ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 66 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 206 bp overlap

ZNF534 1 dataset

ChIP HEK293T GSE78099.ZNF534.HEK293T 203 bp overlap

ZNF549 1 dataset

Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap

Gene	Dist. to TSS	Distance	Link type
REL	28.1 kb	Distal	Multiome
PAPOLG	97.1 kb	Distal	Multiome
PEX13	164.3 kb	Distal	Multiome
PUS10	164.9 kb	Distal	Multiome
SANBR	212.5 kb	Distal	Multiome
C2orf74-DT	291.6 kb	Distal	Multiome
C2orf74	291.7 kb	Distal	Multiome
BCL11A	299.7 kb	Distal	Multiome

Genome Browser