chr2 : 57,510,785 – 57,510,960
175 bp 37 TFs 0 linked genes
This 175 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:57,505,785 – 57,515,960
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ATOH7 2 datasets
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Motif ES_0h ES_0h-ATOH7_MA1468.1 10 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 118 bp overlap
CTCF 67 datasets
ChIP 22Rv1 ENCFF466OXN 175 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 146 bp overlap
ChIP A549 ENCFF034FVO 175 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 116 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 161 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 174 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 134 bp overlap
ChIP GM12864 ENCFF357DQE 175 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 78 bp overlap
ChIP GM12872 ENCFF697BYI 175 bp overlap
ChIP GM12873 ENCFF711LOS 175 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 175 bp overlap
ChIP GM23338 ENCFF531QOI 175 bp overlap
ChIP GM23338 ENCFF772DML 175 bp overlap
ChIP GM23338 ENCFF832KWE 175 bp overlap
ChIP GM23338 ENCFF832KWE 175 bp overlap
ChIP H9 ENCFF152GTF 175 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 151 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 175 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 156 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 151 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 109 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 151 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 157 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 175 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 129 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 175 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 175 bp overlap
ChIP HCT116 ENCFF003KHP 175 bp overlap
ChIP HEK293 ENCFF498RMM 175 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 130 bp overlap
ChIP HFFc6 ENCFF005CJI 89 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 130 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 175 bp overlap
ChIP HepG2 ENCFF127KUP 175 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 144 bp overlap
ChIP MCF 10A ENCFF988BGF 175 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 145 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 175 bp overlap
ChIP PC-3 ENCFF487TUI 175 bp overlap
ChIP PC-3 ENCFF487TUI 124 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 175 bp overlap
ChIP PC-9 ENCFF539ULB 175 bp overlap
ChIP VCaP ENCFF858YQT 175 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 175 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 175 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 171 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 175 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 175 bp overlap
ChIP endodermal cell ENCFF471YCZ 175 bp overlap
ChIP endodermal cell ENCFF471YCZ 94 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 175 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 175 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 175 bp overlap
ChIP heart left ventricle ENCFF888ERQ 175 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 154 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 175 bp overlap
ChIP neural crest cell ENCFF182LWK 175 bp overlap
ChIP neural progenitor cell ENCFF420RBO 175 bp overlap
ChIP neural progenitor cell ENCFF581WPG 175 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 119 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 71 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 120 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 175 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 175 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 175 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 175 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 170 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
DUXA 2 datasets
Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap
Motif ES_0h ES_0h-DUXA_MA0884.2 13 bp overlap
GLIS3 2 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Motif ES_0h ES_0h-GLIS3_MA0737.1 14 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
Motif ES_0h ES_0h-MEIS1_MA1639.2 9 bp overlap
MEIS2 2 datasets
Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap
Motif ES_0h ES_0h-MEIS2_MA1640.2 9 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
MSANTD3 1 dataset
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
NEUROG1 2 datasets
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
Motif ES_0h ES_0h-NEUROG1_MA0623.2 10 bp overlap
NEUROG2 2 datasets
Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap
Motif ES_0h ES_0h-NEUROG2_MA0669.1 10 bp overlap
PBX2 2 datasets
Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap
Motif ES_0h ES_0h-PBX2_MA1113.3 9 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PROP1 2 datasets
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RFX2 2 datasets
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
RFX5 2 datasets
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
SP5 4 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
STAT1 2 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
TCF21 2 datasets
Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap
Motif ES_0h ES_0h-TCF21_MA1568.2 10 bp overlap
TFAP4 2 datasets
Motif DE_12h DE_12h-TFAP4_MA1570.1 10 bp overlap
Motif ES_0h ES_0h-TFAP4_MA1570.1 10 bp overlap
ZBTB33 1 dataset
Motif DE_12h DE_12h-ZBTB33_MA0527.2 10 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZNF274 1 dataset
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
ZNF410 2 datasets
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
Motif ES_0h ES_0h-ZNF410_MA0752.2 16 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
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