chr2 : 54,967,360 54,967,618
258 bp 29 TFs 0 linked genes
This 258 bp open chromatin element has no linked target genes and is bound by 29 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:54,962,360 – 54,972,618
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 188 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 118 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 210 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 148 bp overlap
E2F7 2 datasets
ChIP IMR-90_SENES_E2F7 GSE40343.E2F7.IMR-90_SENES_E2F7 186 bp overlap
ChIP IMR-90_SENES_SHCTR GSE40343.E2F7.IMR-90_SENES_SHCTR 161 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 61 bp overlap
HMGB2 1 dataset
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 258 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 190 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 92 bp overlap
JUN 1 dataset
ChIP A549 ENCFF846DUV 253 bp overlap
MEN1 1 dataset
ChIP HCT-116_B1 GSE152144.MEN1.HCT-116_B1 184 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 176 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 194 bp overlap
ChIP hESC GSE18292.NANOG.hESC 104 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 50 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 178 bp overlap
POLR2A 6 datasets
ChIP A549 ENCFF034EBG 258 bp overlap
ChIP MCF-7 ENCFF164XWP 128 bp overlap
ChIP Panc1 ENCFF290KAB 199 bp overlap
ChIP SK-N-SH ENCFF683PFH 206 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 139 bp overlap
ChIP neural cell ENCFF604SPB 167 bp overlap
RBM22 2 datasets
ChIP K-562 ENCSR848AOP.RBM22.K-562 77 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 77 bp overlap
RBPJ 4 datasets
ChIP GIC GSE79734.RBPJ.GIC 158 bp overlap
ChIP GSC8-11 GSE74557.RBPJ.GSC8-11 241 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 237 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 253 bp overlap
RPA2_phospho 3 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 258 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 258 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 152 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 258 bp overlap
SMAD3 1 dataset
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 258 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 203 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 141 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 73 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 65 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 158 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 237 bp overlap