chr2 : 53,802,336 53,802,928
592 bp 33 TFs 0 linked genes
This 592 bp open chromatin element has no linked target genes and is bound by 33 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:53,797,336 – 53,807,928
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 185 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 128 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 GSE120104.CCAR2.Hep-G2 156 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 101 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 214 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 289 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 175 bp overlap
ChIP DE DE-FOXA2-1 294 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 225 bp overlap
ChIP DE DE-GATA4-1 516 bp overlap
ChIP DE DE-GATA4-2 531 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 480 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 503 bp overlap
ChIP DE DE-GATA6-2 464 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 366 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 235 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 363 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 288 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 319 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 319 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 281 bp overlap
ChIP K562 ENCFF348IBL 84 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 202 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 388 bp overlap
MYOD1 4 datasets
ChIP RD GSE137168.MYOD1.RD 206 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 300 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 352 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 206 bp overlap
MYOG 1 dataset
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 264 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 322 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 397 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 103 bp overlap
ChIP K562 ENCFF167YID 74 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 111 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 101 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 429 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 224 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 335 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 548 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 175 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 255 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 247 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 86 bp overlap
ZNF518A 1 dataset
ChIP HEK293 ENCFF892ULS 85 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 357 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 256 bp overlap
ZXDB 3 datasets
ChIP HEK293 ENCFF835SGA 449 bp overlap
ChIP HEK293 ENCFF835SGA 231 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 309 bp overlap
ZZZ3 1 dataset
ChIP K-562 ENCSR780BBJ.ZZZ3.K-562 266 bp overlap