chr21 : 45,975,731 45,976,305
574 bp 48 TFs 3 linked genes
This 574 bp open chromatin element is linked to ENSG00000274248, ENSG00000289224, and COL6A1 and is bound by 48 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000274248 1.2 kb Proximal Proximity
ENSG00000289224 1.4 kb Proximal Proximity
COL6A1 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:45,970,731 – 45,981,305
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
EP300 1 dataset
ChIP Ishikawa ENCFF364ZWT 246 bp overlap
EZH2 2 datasets
ChIP neural progenitor cell ENCFF018MKA 56 bp overlap
ChIP neural progenitor cell ENCFF472NFV 532 bp overlap
FIGLA 1 dataset
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
Motif DE_24h DE_24h-FOXA2_MA0047.4 8 bp overlap
FOXK1 1 dataset
Motif DE_24h DE_24h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_24h DE_24h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_24h DE_24h-FOXL1_MA0033.2 7 bp overlap
FOXM1 1 dataset
ChIP Ishikawa ENCFF578VDD 351 bp overlap
FOXO4 1 dataset
Motif DE_24h DE_24h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_24h DE_24h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_24h DE_24h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_24h DE_24h-FOXP3_MA0850.1 7 bp overlap
FOXS1 1 dataset
Motif DE_24h DE_24h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_24h DE_24h-Foxf1_MA1606.2 7 bp overlap
Foxo1 1 dataset
Motif DE_24h DE_24h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_24h DE_24h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_24h DE_24h-Foxq1_MA0040.2 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 338 bp overlap
ChIP DE DE-GATA4-2 534 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 434 bp overlap
ChIP DE DE-GATA6-2 423 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 548 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 549 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 552 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 528 bp overlap
GLI3 1 dataset
Motif DE_24h DE_24h-GLI3_MA1491.3 15 bp overlap
GLIS1 3 datasets
Motif DE_24h DE_24h-GLIS1_MA0735.2 15 bp overlap
ChIP HEK293 ENCFF299RSE 254 bp overlap
ChIP HEK293 ENCFF299RSE 138 bp overlap
GLIS2 1 dataset
Motif DE_24h DE_24h-GLIS2_MA0736.1 14 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 524 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 557 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 507 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF133OLU 146 bp overlap
KLF13 1 dataset
Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
PBX3 1 dataset
Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap
PKNOX1 2 datasets
Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCFF589FCY 209 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF759BBR 391 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 570 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 300 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 125 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 574 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 574 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 574 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 574 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 574 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 296 bp overlap
TBX21 1 dataset
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX5 1 dataset
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 344 bp overlap
ChIP Ishikawa ENCFF467DDW 127 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 80 bp overlap
VEZF1 1 dataset
Motif DE_24h DE_24h-VEZF1_MA1578.2 6 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 161 bp overlap
ZEB1 1 dataset
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZNF341 1 dataset
Motif DE_24h DE_24h-ZNF341_MA1655.2 8 bp overlap
ZNF684 1 dataset
Motif DE_24h DE_24h-ZNF684_MA1600.2 14 bp overlap
ZNF692 1 dataset
Motif DE_24h DE_24h-ZNF692_MA1986.2 8 bp overlap
Znf423 1 dataset
Motif DE_24h DE_24h-Znf423_MA0116.1 15 bp overlap