Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 236 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCFF432ZEW 212 bp overlap

CTNNB1 1 dataset

ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 191 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 176 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 186 bp overlap

E2F8 1 dataset

Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap

EP300 2 datasets

ChIP H1 ENCFF927IYK 243 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 161 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 131 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

JUN 4 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 166 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 243 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 164 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 232 bp overlap

MAX 3 datasets

ChIP H1 ENCFF601FOM 243 bp overlap

ChIP H1 ENCFF914VQY 243 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 174 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 102 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 108 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 243 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 243 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 243 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 166 bp overlap

ChIP hESC GSE18292.NANOG.hESC 57 bp overlap

NFYA 1 dataset

Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap

NFYB 1 dataset

Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap

NIPBL 2 datasets

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 243 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 222 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 243 bp overlap

Nr2e1 1 dataset

Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 243 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 207 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 218 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

SMAD2 3 datasets

ChIP hESC GSE29422.SMAD2.hESC 243 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 243 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 243 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 243 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 243 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 243 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 243 bp overlap

SMAD2_3 7 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 230 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 222 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 243 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 213 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 243 bp overlap

ChIP ESC S23-ESC-d0-SMAD2_3-exp1 243 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 243 bp overlap

SMAD3 4 datasets

ChIP BG03 GSE21614.SMAD3.BG03 206 bp overlap

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 178 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 159 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 243 bp overlap

SMAD4 1 dataset

ChIP hESC GSE29422.SMAD4.hESC 243 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 243 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 133 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 159 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 146 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 216 bp overlap

TFDP1 1 dataset

Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 221 bp overlap

ZBTB18 1 dataset

Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap

ZIM3 1 dataset

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZNF157 1 dataset

Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

Genome Browser