chr20 : 56,632,340 56,632,526
186 bp 23 TFs 2 linked genes
This 186 bp open chromatin element is linked to TFAP2C and ENSG00000289199 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TFAP2C 3.0 kb Proximal Proximity
ENSG00000289199 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:56,627,340 – 56,637,526
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 186 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 92 bp overlap
CHD1 1 dataset
ChIP MCF-7 ENCFF937PTG 186 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 182 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 186 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 186 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCFF305BNP 141 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 177 bp overlap
EZH2 9 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 186 bp overlap
ChIP A673 ENCFF790MVL 136 bp overlap
ChIP A673 ENCFF790MVL 186 bp overlap
ChIP A673 ENCFF955JRZ 161 bp overlap
ChIP A673 ENCFF955JRZ 186 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 160 bp overlap
ChIP SK-N-MC ENCFF674XUJ 186 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 186 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 175 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 186 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 186 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 163 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 186 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 186 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 186 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 186 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 186 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 186 bp overlap
MEN1 1 dataset
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 186 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 116 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 186 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 186 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 186 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 130 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 186 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 54 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 186 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 186 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 61 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 185 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 72 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 149 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 186 bp overlap
ZBTB40 1 dataset
ChIP MCF-7 ENCFF044DWL 186 bp overlap