chr20 : 51,308,313 – 51,308,876
563 bp 27 TFs 2 linked genes
This 563 bp open chromatin element is linked to NFATC2 and KCNG1 and is bound by 27 transcription factors.
Linked Genes
2 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NFATC2 254.1 kb Distal Multiome
KCNG1 285.4 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:51,303,313 – 51,313,876
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
AR 21 datasets
ChIP DU145 GSE47987.AR.DU145 123 bp overlap
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 126 bp overlap
ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 106 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 113 bp overlap
ChIP PC-3 GSE54110.AR.PC-3 88 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 199 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 113 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 106 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 214 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 142 bp overlap
ChIP VCaP_R1881 GSE79128.AR.VCaP_R1881 180 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 109 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 103 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 238 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 186 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 231 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 215 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 214 bp overlap
ChIP endometrial-stromal-cell GSE119432.AR.endometrial-stromal-cell 73 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 146 bp overlap
ChIP prostate GSE56288.AR.prostate 114 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 256 bp overlap
BRD4 1 dataset
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 151 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 98 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 170 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 280 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 260 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 372 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 346 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 306 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 204 bp overlap
EZH2 1 dataset
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 92 bp overlap
FOXA1 1 dataset
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 87 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 453 bp overlap
ChIP DE DE-FOXA2-2 384 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 397 bp overlap
ChIP DE DE-GATA4-2 521 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 405 bp overlap
ChIP DE DE-GATA6-2 512 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR854MCV.IRF1.K-562 179 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 338 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 259 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 351 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 154 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 159 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 425 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 102 bp overlap
NR3C1 24 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 148 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 124 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 94 bp overlap
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 300 bp overlap
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 222 bp overlap
ChIP BEAS-2B_TNF-DEX GSE125623.NR3C1.BEAS-2B_TNF-DEX 190 bp overlap
ChIP BEAS-2B_TNF-DEX_IA1 GSE125623.NR3C1.BEAS-2B_TNF-DEX_IA1 245 bp overlap
ChIP HCC1937 GSE152203.NR3C1.HCC1937 113 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 178 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 145 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 95 bp overlap
ChIP MCF-10A_DEX_60min GSE102355.NR3C1.MCF-10A_DEX_60min 266 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 131 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 121 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 284 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 153 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 257 bp overlap
ChIP THP-1_Dex GSE99887.NR3C1.THP-1_Dex 97 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 74 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 227 bp overlap
ChIP U2OS_SHNS GSE65847.NR3C1.U2OS_SHNS 208 bp overlap
ChIP U2OS_siBRMsiHic5 GSE109383.NR3C1.U2OS_siBRMsiHic5 161 bp overlap
ChIP U2OS_siHic5siNS GSE109383.NR3C1.U2OS_siHic5siNS 197 bp overlap
ChIP hMSC_DMI GSE68864.NR3C1.hMSC_DMI 157 bp overlap
PGR 15 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 194 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 304 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 191 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 150 bp overlap
ChIP T-47D-B_E2_R5020 GSE80358.PGR.T-47D-B_E2_R5020 117 bp overlap
ChIP T-47D-B_R5020 GSE80358.PGR.T-47D-B_R5020 145 bp overlap
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 164 bp overlap
ChIP T-47D_PG GSE68356.PGR.T-47D_PG 169 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 168 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 158 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 137 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 142 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 122 bp overlap
ChIP T-47D_progesterone_siCEBPA GSE132649.PGR.T-47D_progesterone_siCEBPA 132 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 123 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 227 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 180 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 162 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 549 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 54 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 194 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 110 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 309 bp overlap
TP53 1 dataset
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 76 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 87 bp overlap
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