chr20 : 21,104,397 21,104,630
233 bp 26 TFs 1 linked gene
This 233 bp open chromatin element is linked to LINC00237 and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC00237 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:21,099,397 – 21,109,630
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 233 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 233 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 233 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 197 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 233 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 233 bp overlap
BRD4 2 datasets
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 224 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 203 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 101 bp overlap
CTCF 7 datasets
ChIP H9 ENCFF152GTF 233 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 114 bp overlap
ChIP HepG2 ENCFF127KUP 169 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 110 bp overlap
ChIP endodermal cell ENCFF471YCZ 122 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 75 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 231 bp overlap
EZH2 26 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 233 bp overlap
ChIP A673 ENCFF955JRZ 227 bp overlap
ChIP GM23248 ENCFF404ZHM 233 bp overlap
ChIP GM23248 ENCFF404ZHM 233 bp overlap
ChIP GM23338 ENCFF613YON 77 bp overlap
ChIP H1 ENCFF232NZA 233 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 233 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 233 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 233 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 233 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 146 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 85 bp overlap
ChIP T98G GSE112240.EZH2.T98G 233 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 58 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 229 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 233 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 233 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 217 bp overlap
ChIP fibroblast of lung ENCFF479BAW 79 bp overlap
ChIP hepatocyte ENCFF552DZB 233 bp overlap
ChIP hepatocyte ENCFF552DZB 233 bp overlap
ChIP keratinocyte ENCFF070STK 233 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 167 bp overlap
ChIP neural cell ENCFF610EPB 151 bp overlap
ChIP neural progenitor cell ENCFF018MKA 233 bp overlap
ChIP neural progenitor cell ENCFF472NFV 233 bp overlap
JARID2 1 dataset
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 233 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 229 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 233 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 180 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 86 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 233 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 152 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 185 bp overlap
RING1 2 datasets
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 174 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 233 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 233 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 233 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 233 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 209 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 169 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 233 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 187 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 226 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 233 bp overlap