chr18 : 41,595,959 – 41,596,273

314 bp 60 TFs 0 linked genes

This 314 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

ATF4 1 dataset

Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap

CDX1 1 dataset

Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap

CDX2 1 dataset

Motif DE_60h DE_60h-CDX2_MA0465.3 8 bp overlap

CDX4 1 dataset

Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap

CEBPG 1 dataset

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

ELF2 2 datasets

Motif DE_48h DE_48h-ELF2_MA1483.3 10 bp overlap

Motif DE_60h DE_60h-ELF2_MA1483.3 10 bp overlap

ETV1 2 datasets

Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap

Motif DE_60h DE_60h-ETV1_MA0761.3 9 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 245 bp overlap

FOXA2 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 306 bp overlap

ChIP DE DE-FOXA2-1 314 bp overlap

ChIP DE DE-FOXA2-2 304 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 261 bp overlap

FOXD3 2 datasets

Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap

Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap

FOXH1 2 datasets

Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

Foxl2 1 dataset

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

GATA4 8 datasets

ChIP DE DE-GATA4-1 314 bp overlap

ChIP DE DE-GATA4-2 314 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 204 bp overlap

ChIP foregut GSE117136.GATA4.foregut 314 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 314 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 314 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 314 bp overlap

ChIP DE DE-GATA6-2 314 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 279 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 272 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 314 bp overlap

ChIP foregut GSE117136.GATA6.foregut 314 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 314 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 314 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 314 bp overlap

HOXA10 1 dataset

Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap

HOXA4 2 datasets

Motif DE_48h DE_48h-HOXA4_MA1496.2 7 bp overlap

Motif DE_60h DE_60h-HOXA4_MA1496.2 7 bp overlap

HOXB13 1 dataset

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

HOXB4 2 datasets

Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap

Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap

HOXC4 2 datasets

Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap

Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap

HOXD4 2 datasets

Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap

Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap

HOXD9 1 dataset

Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap

Hoxa13 1 dataset

Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap

Hoxd13 1 dataset

Motif DE_60h DE_60h-Hoxd13_MA0909.4 7 bp overlap

IKZF2 2 datasets

Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 2 datasets

Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap

Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap

JUN 1 dataset

Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap

KDM1A 2 datasets

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 298 bp overlap

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 241 bp overlap

KLF9 2 datasets

Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap

Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap

LIN54 1 dataset

Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 2 datasets

Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NFATC3 2 datasets

Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

NFATC4 2 datasets

Motif DE_48h DE_48h-NFATC4_MA1525.3 9 bp overlap

Motif DE_60h DE_60h-NFATC4_MA1525.3 9 bp overlap

Nfatc1 2 datasets

Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Nr2e3 1 dataset

Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 307 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 314 bp overlap

ONECUT2 1 dataset

ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 218 bp overlap

PDX1 2 datasets

ChIP hESC GSE58685.PDX1.hESC 205 bp overlap

ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_60h DE_60h-POU2F1SOX2_MA1962.1 17 bp overlap

POU6F1 2 datasets

Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap

Motif DE_60h DE_60h-POU6F1_MA1549.2 7 bp overlap

POU6F2 2 datasets

Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap

Motif DE_60h DE_60h-POU6F2_MA0793.2 9 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 97 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap

RREB1 1 dataset

Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 273 bp overlap

SOX10 1 dataset

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 219 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 264 bp overlap

Sox17 1 dataset

Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap

Sox6 1 dataset

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

Stat6 1 dataset

Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap

ZBTB26 2 datasets

Motif DE_48h DE_48h-ZBTB26_MA1579.2 8 bp overlap

Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap

ZNF157 2 datasets

Motif DE_48h DE_48h-ZNF157_MA2331.1 21 bp overlap

Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap

ZNF652 1 dataset

Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap

ZNF768 2 datasets

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap

ZSCAN21 2 datasets

Motif DE_60h DE_60h-ZSCAN21_MA2336.1 7 bp overlap

ZSCAN4 1 dataset

Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap

Znf423 1 dataset

Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap