chr18 : 36,608,248 36,608,708
460 bp 46 TFs 0 linked genes
This 460 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:36,603,248 – 36,613,708
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 220 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 404 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 414 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 405 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 237 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 229 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 382 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 168 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 115 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 352 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 71 bp overlap
GATA2 1 dataset
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 245 bp overlap
ChIP DE DE-GATA4-2 356 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 207 bp overlap
ChIP foregut GSE117136.GATA4.foregut 402 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 418 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 371 bp overlap
GATA5 2 datasets
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 149 bp overlap
ChIP DE DE-GATA6-1 306 bp overlap
ChIP DE DE-GATA6-2 460 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 310 bp overlap
ChIP foregut GSE117136.GATA6.foregut 390 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 364 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 325 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 416 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 362 bp overlap
GFI1 2 datasets
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gata3 2 datasets
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Gfi1B 2 datasets
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HNF1A 3 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 204 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 145 bp overlap
ChIP NY15 GSE108150.HNF1A.NY15 176 bp overlap
HNF1B 2 datasets
ChIP PDAC GSE64557.HNF1B.PDAC 460 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 460 bp overlap
HOXB4 1 dataset
Motif DE_72h DE_72h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_72h DE_72h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_72h DE_72h-HOXD4_MA1507.2 6 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 103 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 82 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 201 bp overlap
ChIP K562 ENCFF167YID 263 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 199 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 170 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 297 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PRDM9 1 dataset
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
Prdm5 2 datasets
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 299 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 63 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 90 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
TRPS1 2 datasets
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Vdr 1 dataset
Motif DE_72h DE_72h-Vdr_MA0693.4 7 bp overlap
Wt1 1 dataset
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZBTB17 1 dataset
Motif DE_72h DE_72h-ZBTB17_MA2102.1 8 bp overlap
ZKSCAN5 2 datasets
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF24 2 datasets
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ZNF266 2 datasets
ChIP HEK293 ENCFF483FIW 147 bp overlap
ChIP HEK293 ENCSR466VYP.ZNF266.HEK293 180 bp overlap
ZNF354A 1 dataset
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF382 1 dataset
Motif DE_72h DE_72h-ZNF382_MA1594.1 24 bp overlap