Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

38 transcription factors

AR 2 datasets

ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 249 bp overlap

ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 146 bp overlap

Arid3a 2 datasets

Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap

Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap

CEBPB 1 dataset

ChIP IMR-90 ENCFF468UGY 194 bp overlap

CTCF 3 datasets

ChIP U-937 ERP008568.CTCF.U-937 212 bp overlap

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 169 bp overlap

ChIP erythroid GSE67783.CTCF.erythroid 216 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF262VBH 251 bp overlap

ChIP BLaER1 ENCFF335XTP 393 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 154 bp overlap

ChIP hESC GSE26097.EOMES.hESC 127 bp overlap

ESR1 2 datasets

ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 186 bp overlap

ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 138 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 148 bp overlap

FOXA1 1 dataset

ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 159 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 570 bp overlap

ChIP DE DE-FOXA2-1 185 bp overlap

ChIP DE DE-FOXA2-2 360 bp overlap

GATA2 4 datasets

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap

ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 132 bp overlap

ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 113 bp overlap

GATA4 8 datasets

ChIP DE DE-GATA4-1 1049 bp overlap

ChIP DE DE-GATA4-2 1038 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 707 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 636 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 280 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 406 bp overlap

GATA5 2 datasets

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap

GATA6 20 datasets

ChIP AGS GSE51705.GATA6.AGS 362 bp overlap

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 240 bp overlap

ChIP DE DE-GATA6-1 1032 bp overlap

ChIP DE DE-GATA6-2 1050 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 526 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 640 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 183 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 458 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 969 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 608 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 227 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 577 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 966 bp overlap

ChIP foregut GSE117136.GATA6.foregut 634 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 396 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 561 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 497 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 326 bp overlap

Gata3 2 datasets

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap

JUN 3 datasets

ChIP 786-O GSE86092.JUN.786-O 314 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 311 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 229 bp overlap

KLF3 2 datasets

Motif DE_60h DE_60h-KLF3_MA1516.2 10 bp overlap

Motif DE_72h DE_72h-KLF3_MA1516.2 10 bp overlap

Mecom 2 datasets

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap

NRIP1 1 dataset

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 154 bp overlap

Nr2F6 2 datasets

Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap

Motif DE_72h DE_72h-Nr2F6_MA0728.1 15 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 202 bp overlap

POU4F1 2 datasets

Motif DE_60h DE_60h-POU4F1_MA0790.2 12 bp overlap

Motif DE_72h DE_72h-POU4F1_MA0790.2 12 bp overlap

POU4F3 2 datasets

Motif DE_60h DE_60h-POU4F3_MA0791.2 12 bp overlap

Motif DE_72h DE_72h-POU4F3_MA0791.2 12 bp overlap

POU5F1 1 dataset

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 307 bp overlap

Rarb 2 datasets

Motif DE_60h DE_60h-Rarb_MA0857.1 16 bp overlap

Motif DE_72h DE_72h-Rarb_MA0857.1 16 bp overlap

Rarg 2 datasets

Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap

Motif DE_72h DE_72h-Rarg_MA0859.2 15 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1039 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 572 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1017 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 913 bp overlap

SMARCA4 1 dataset

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 51 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 447 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 232 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 861 bp overlap

STAT1 1 dataset

Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap

Stat4 1 dataset

Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap

TCF7L1 2 datasets

Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap

Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap

TRIM28 1 dataset

ChIP AF22 GSE84259.TRIM28.AF22 233 bp overlap

TRPS1 2 datasets

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap

ZNF582 2 datasets

Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap

Motif DE_72h DE_72h-ZNF582_MA1983.2 19 bp overlap

Genome Browser