chr1 : 247,096,630 247,096,915
285 bp 29 TFs 2 linked genes
This 285 bp open chromatin element is linked to ZNF669 and ENSG00000286747 and is bound by 29 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZNF669 7.5 kb Proximal Proximity
ENSG00000286747 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:247,091,630 – 247,101,915
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 143 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 285 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 128 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 285 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 200 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 153 bp overlap
FOXA1 1 dataset
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 117 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 213 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 280 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 196 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCFF485YIB 285 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 191 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 285 bp overlap
ChIP DE DE-GATA4-2 285 bp overlap
ChIP foregut GSE117136.GATA4.foregut 258 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 285 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 185 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 166 bp overlap
ChIP DE DE-GATA6-1 285 bp overlap
ChIP DE DE-GATA6-2 285 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 285 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 285 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 285 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 285 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 285 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 285 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 195 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap
ChIP foregut GSE117136.GATA6.foregut 263 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 263 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 195 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 256 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 96 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 88 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 201 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 237 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 169 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 271 bp overlap
PML 1 dataset
ChIP GM12878 ENCSR000BQM.PML.GM12878 156 bp overlap
POLR2A 6 datasets
ChIP GM12892 ENCFF245LYF 144 bp overlap
ChIP GM23338 ENCFF450WCS 181 bp overlap
ChIP H1 ENCFF833NJP 85 bp overlap
ChIP HL-60 ENCFF321XKE 163 bp overlap
ChIP K562 ENCFF215CWW 241 bp overlap
ChIP SK-N-SH ENCFF683PFH 189 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 157 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 183 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 153 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 110 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 285 bp overlap
ChIP H1 ENCFF881NFR 285 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 193 bp overlap
ZNF711 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZNF711.HEK293T_22Rv1 128 bp overlap