chr1 : 244,056,664 244,056,907
243 bp 37 TFs 2 linked genes
This 243 bp open chromatin element is linked to ZBTB18 and ENSG00000289055 and is bound by 37 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZBTB18 8.1 kb Proximal Proximity
ENSG00000289055 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:244,051,664 – 244,061,907
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 243 bp overlap
BRD4 3 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 243 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 243 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 154 bp overlap
CBX8 2 datasets
ChIP K-562 ENCSR000ATW.CBX8.K-562 205 bp overlap
ChIP K562 ENCFF485TBL 168 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 243 bp overlap
CTCF 1 dataset
ChIP dorsolateral prefrontal cortex ENCFF733NZH 80 bp overlap
ESR1 3 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 243 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 174 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 217 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 224 bp overlap
FOXA1 3 datasets
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 94 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 243 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 243 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 221 bp overlap
ChIP DE DE-FOXA2-2 189 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 107 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 171 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 222 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 243 bp overlap
HNRNPK 3 datasets
ChIP HepG2 ENCFF493GNS 122 bp overlap
ChIP HepG2 ENCFF826MXP 114 bp overlap
ChIP K562 ENCFF954RNO 122 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 129 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE83671.KMT2A.THP-1 242 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 213 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 207 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 233 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 91 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 130 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 68 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 243 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 230 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 243 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 149 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 243 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 243 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 141 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 117 bp overlap
ChIP K562 ENCFF022XJR 126 bp overlap
RUNX1 1 dataset
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 60 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 243 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 178 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 207 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 209 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 123 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 105 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 243 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 243 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 223 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 178 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 231 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 243 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 154 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 124 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 243 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 166 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 243 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 202 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 177 bp overlap