chr16 : 58,223,485 58,223,724
239 bp 41 TFs 0 linked genes
This 239 bp open chromatin element has no linked target genes and is bound by 41 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:58,218,485 – 58,228,724
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
BARX1 1 dataset
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 144 bp overlap
DLX1 1 dataset
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 213 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 239 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 239 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 239 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 239 bp overlap
GBX2 1 dataset
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
Hmx1 1 dataset
Motif DE_24h DE_24h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_24h DE_24h-Hmx3_MA0898.2 9 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 239 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 239 bp overlap
LBX2 1 dataset
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
MSX1 1 dataset
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 193 bp overlap
Msx3 1 dataset
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
Nobox 1 dataset
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 160 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 198 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 153 bp overlap
RAX 1 dataset
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
RREB1 1 dataset
Motif DE_24h DE_24h-RREB1_MA0073.2 19 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 163 bp overlap
SMAD2 1 dataset
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 239 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 239 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 239 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 239 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 239 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 239 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 239 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
STAT5A 1 dataset
ChIP MV4-11 GSE64862.STAT5A.MV4-11 134 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ZNF341 1 dataset
Motif DE_24h DE_24h-ZNF341_MA1655.2 8 bp overlap
ZNF414 1 dataset
ChIP HepG2 ENCFF809EHH 137 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 97 bp overlap
ZNF770 1 dataset
Motif DE_24h DE_24h-ZNF770_MA2099.1 8 bp overlap