chr16 : 5,619,262 5,619,788
526 bp 29 TFs 1 linked gene
This 526 bp open chromatin element is linked to LINC01570 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01570 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:5,614,262 – 5,624,788
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 251 bp overlap
BRD4 2 datasets
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 132 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 478 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 335 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 223 bp overlap
ESR1 12 datasets
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 219 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 526 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 321 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 401 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 526 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 248 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 356 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 282 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 284 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 69 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 431 bp overlap
ChIP breast_tumor_Male_7 GSE104399.ESR1.breast_tumor_Male_7 270 bp overlap
EZH2 4 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 311 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 349 bp overlap
ChIP T98G GSE112240.EZH2.T98G 207 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 135 bp overlap
FOXA1 3 datasets
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 157 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 157 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 313 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 390 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 441 bp overlap
GATA2 2 datasets
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 223 bp overlap
GATA3 5 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 309 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 272 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 166 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 196 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 196 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 265 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 365 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 526 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 475 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 523 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 286 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 486 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 446 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 251 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 526 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 254 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 457 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 199 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 389 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 412 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 303 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 252 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 462 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 441 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 147 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 147 bp overlap