chr15 : 39,844,965 39,845,763
798 bp 26 TFs 4 linked genes
This 798 bp open chromatin element is linked to 4 target genes and is bound by 26 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
GPR176 74.8 kb Distal Multiome
EIF2AK4 88.7 kb Distal Multiome
SRP14 193.7 kb Distal Multiome
SRP14-DT 193.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:39,839,965 – 39,850,763
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 263 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 264 bp overlap
CTCF 1 dataset
ChIP keratinocyte_mut2 GSE123711.CTCF.keratinocyte_mut2 148 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 378 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 231 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 239 bp overlap
ChIP DE DE-FOXA2-1 616 bp overlap
ChIP DE DE-FOXA2-2 563 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 309 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 798 bp overlap
ChIP DE DE-GATA4-2 798 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 318 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 195 bp overlap
ChIP foregut GSE117136.GATA4.foregut 358 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 643 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 424 bp overlap
GATA6 14 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 218 bp overlap
ChIP DE DE-GATA6-1 798 bp overlap
ChIP DE DE-GATA6-2 798 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 688 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 798 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 798 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 749 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 798 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 798 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 590 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 289 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 432 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 433 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 220 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 165 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 107 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 249 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 289 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 259 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 320 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 158 bp overlap
NR3C1 3 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 101 bp overlap
ChIP NALM-6 GSE67046.NR3C1.NALM-6 132 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 177 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 179 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 337 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 798 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 654 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 541 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 531 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 595 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 798 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 462 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 142 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 342 bp overlap
STAT3 1 dataset
ChIP MDA-MB-361 GSE152203.STAT3.MDA-MB-361 62 bp overlap
ZFP64 2 datasets
ChIP HEK293 GSE76494.ZFP64.HEK293 168 bp overlap
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 250 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR385AHH.ZNF24.K-562 214 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 101 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 56 bp overlap