chr14 : 70,143,177 70,143,906
729 bp 51 TFs 2 linked genes
This 729 bp open chromatin element is linked to COX16 and SYNJ2BP and is bound by 51 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
COX16 273.4 kb Distal Multiome
SYNJ2BP 273.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:70,138,177 – 70,148,906
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 52 bp overlap
Atoh1 4 datasets
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
Motif DE_72h DE_72h-Atoh1_MA1467.3 7 bp overlap
Motif DE_72h DE_72h-Atoh1_MA1467.3 7 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 327 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 276 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 244 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 410 bp overlap
FANCL 1 dataset
ChIP Jurkat GSE45864.FANCL.Jurkat 175 bp overlap
FIGLA 3 datasets
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 636 bp overlap
ChIP DE DE-FOXA2-2 452 bp overlap
FOXG1 2 datasets
Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap
Motif DE_72h DE_72h-FOXG1_MA0613.1 8 bp overlap
FOXN3 2 datasets
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 546 bp overlap
ChIP DE DE-GATA4-2 515 bp overlap
ChIP foregut GSE117136.GATA4.foregut 274 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 535 bp overlap
ChIP DE DE-GATA6-2 596 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 396 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 487 bp overlap
ChIP foregut GSE117136.GATA6.foregut 294 bp overlap
GFI1 2 datasets
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
Gfi1B 2 datasets
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
Gmeb1 2 datasets
Motif DE_60h DE_60h-Gmeb1_MA0615.2 6 bp overlap
Motif DE_72h DE_72h-Gmeb1_MA0615.2 6 bp overlap
HAND2 4 datasets
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 432 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 91 bp overlap
MSC 1 dataset
Motif DE_72h DE_72h-MSC_MA0665.1 10 bp overlap
MYF6 1 dataset
Motif DE_72h DE_72h-MYF6_MA0667.1 10 bp overlap
MYOD1 1 dataset
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
Msgn1 2 datasets
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NEUROD1 4 datasets
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_72h DE_72h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_72h DE_72h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 4 datasets
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_72h DE_72h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_72h DE_72h-NEUROG2_MA1642.2 7 bp overlap
Neurod2 4 datasets
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
PKNOX2 1 dataset
Motif DE_72h DE_72h-PKNOX2_MA0783.1 12 bp overlap
PPARG 2 datasets
Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap
Motif DE_72h DE_72h-PPARG_MA0066.2 19 bp overlap
Pparg::Rxra 2 datasets
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
Prdm5 4 datasets
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
Ptf1A 3 datasets
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 626 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 147 bp overlap
SNAI2 1 dataset
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 334 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 652 bp overlap
SOX8 2 datasets
Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap
Motif DE_72h DE_72h-SOX8_MA0868.3 7 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 116 bp overlap
SRY 2 datasets
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
Motif DE_72h DE_72h-SRY_MA0084.2 7 bp overlap
TBX19 2 datasets
Motif DE_60h DE_60h-TBX19_MA0804.2 17 bp overlap
Motif DE_72h DE_72h-TBX19_MA0804.2 17 bp overlap
TBXT 2 datasets
Motif DE_60h DE_60h-TBXT_MA0009.2 16 bp overlap
Motif DE_72h DE_72h-TBXT_MA0009.2 16 bp overlap
TGIF1 1 dataset
Motif DE_72h DE_72h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_72h DE_72h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_72h DE_72h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_72h DE_72h-TGIF2LY_MA1572.1 12 bp overlap
ZEB1 3 datasets
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 56 bp overlap
ZSCAN21 2 datasets
Motif DE_60h DE_60h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_72h DE_72h-ZSCAN21_MA2336.1 7 bp overlap
Znf423 2 datasets
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap
Motif DE_72h DE_72h-Znf423_MA0116.1 15 bp overlap