chr14 : 54,339,793 – 54,340,195

402 bp 66 TFs 0 linked genes

This 402 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

Ascl2 1 dataset

Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap

CEBPB 1 dataset

ChIP WA01 ENCSR000EBV.CEBPB.WA01 156 bp overlap

CTCF 1 dataset

ChIP keratinocyte GSE154221.CTCF.keratinocyte 264 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 251 bp overlap

DMRTA1 1 dataset

Motif DE_36h DE_36h-DMRTA1_MA1707.2 10 bp overlap

DMRTC2 1 dataset

Motif DE_36h DE_36h-DMRTC2_MA1479.2 11 bp overlap

EHF 1 dataset

Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 402 bp overlap

ETV1 1 dataset

Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap

Erg 1 dataset

Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 402 bp overlap

ChIP DE DE-FOXA2-2 402 bp overlap

Foxl2 1 dataset

Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap

GABPA 1 dataset

Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 402 bp overlap

ChIP DE DE-GATA4-2 402 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 402 bp overlap

ChIP DE DE-GATA6-2 402 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 402 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 402 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 402 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 402 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 402 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 402 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 380 bp overlap

GLIS2 1 dataset

Motif DE_36h DE_36h-GLIS2_MA0736.1 14 bp overlap

HSF4 1 dataset

Motif DE_36h DE_36h-HSF4_MA0771.1 13 bp overlap

Hic1 1 dataset

Motif DE_36h DE_36h-Hic1_MA0739.2 8 bp overlap

Hmx1 1 dataset

Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap

Hmx2 1 dataset

Motif DE_36h DE_36h-Hmx2_MA0897.2 15 bp overlap

Hmx3 1 dataset

Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap

IKZF2 1 dataset

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

ISL2 1 dataset

Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap

Ikzf3 1 dataset

Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap

JUN 6 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 402 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 341 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 402 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 402 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 331 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 402 bp overlap

MYB 1 dataset

Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap

NANOG 6 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 313 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 323 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 402 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 342 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 309 bp overlap

ChIP hESC GSE18292.NANOG.hESC 99 bp overlap

NFATC3 1 dataset

Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap

NFIA 1 dataset

Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap

NIPBL 2 datasets

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 194 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 252 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 81 bp overlap

NKX2-3 1 dataset

Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap

NKX2-8 1 dataset

Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap

Nfatc1 1 dataset

Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap

Nkx3-2 1 dataset

Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap

POU2F1 1 dataset

Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F3 1 dataset

Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap

POU5F1 3 datasets

Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 266 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 314 bp overlap

POU5F1B 1 dataset

Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap

RFX7 1 dataset

Motif DE_36h DE_36h-RFX7_MA1554.2 8 bp overlap

RORA 2 datasets

Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap

SMAD2 3 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 402 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 348 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 305 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 402 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 402 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 402 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 402 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 402 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 402 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 402 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 402 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 340 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 397 bp overlap

SMARCA4 1 dataset

ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 313 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 402 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 402 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 261 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 402 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 257 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 273 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 238 bp overlap

TCF4 1 dataset

ChIP LS180 GSE31939.TCF4.LS180 92 bp overlap

ZBTB26 1 dataset

Motif DE_36h DE_36h-ZBTB26_MA1579.2 8 bp overlap

ZIC5 1 dataset

Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap

ZNF416 1 dataset

Motif DE_36h DE_36h-ZNF416_MA1979.2 10 bp overlap

ZNF547 1 dataset

Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap

ZSCAN4 1 dataset

Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap