chr1 : 224,720,167 224,720,687
520 bp 31 TFs 4 linked genes
This 520 bp open chromatin element is linked to 4 target genes and is bound by 31 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000286719 161.0 kb Distal Multiome
DNAH14 209.3 kb Distal Multiome
CNIH3 285.5 kb Distal Multiome
WDR26 285.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:224,715,167 – 224,725,687
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 157 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 181 bp overlap
BRD4 2 datasets
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 124 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 180 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 70 bp overlap
CREB1 2 datasets
ChIP MCF-7 ENCFF867SAS 150 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 124 bp overlap
CTCF 3 datasets
ChIP body of pancreas ENCFF881RGF 92 bp overlap
ChIP endodermal cell ENCFF471YCZ 424 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 178 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
E2F6 2 datasets
ChIP WA01 ENCSR000BSI.E2F6.WA01 141 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 143 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 226 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 230 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 196 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 215 bp overlap
FOXA1 1 dataset
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 187 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 129 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 157 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 184 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 281 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 431 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 172 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 224 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 155 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 196 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 253 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 237 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 171 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 253 bp overlap
PGR 2 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 208 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 54 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 121 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 142 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 356 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 226 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 210 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ZNF148 1 dataset
ChIP HEK293 ENCFF400TDN 345 bp overlap
ZNF317 2 datasets
ChIP HEK293 GSE76494.ZNF317.HEK293 175 bp overlap
ChIP WTC11 ENCFF537KXI 357 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 107 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 60 bp overlap