chr13 : 93,145,158 93,145,668
510 bp 36 TFs 0 linked genes
This 510 bp open chromatin element has no linked target genes and is bound by 36 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:93,140,158 – 93,150,668
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 251 bp overlap
Crx 1 dataset
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
ESRRA 1 dataset
Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap
Esrrg 1 dataset
Motif ES_0h ES_0h-Esrrg_MA0643.2 9 bp overlap
GATA4 1 dataset
Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap
GSC 1 dataset
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
Hnf1A 1 dataset
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 287 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 476 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 286 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 425 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MXI1 1 dataset
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 510 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 335 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 510 bp overlap
NR5A1 1 dataset
Motif ES_0h ES_0h-NR5A1_MA1540.3 12 bp overlap
Nr5A2 1 dataset
Motif ES_0h ES_0h-Nr5A2_MA0505.3 9 bp overlap
OTX1 1 dataset
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
PITX1 1 dataset
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 318 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 268 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 71 bp overlap
RHOXF1 1 dataset
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
SMARCA4 2 datasets
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 230 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 103 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 100 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 162 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 445 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 256 bp overlap
TBX21 1 dataset
Motif ES_0h ES_0h-TBX21_MA0690.3 10 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 238 bp overlap
USF1 1 dataset
Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap
YY1 1 dataset
ChIP H1 ENCFF524BTL 337 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 463 bp overlap
ZNF786 1 dataset
ChIP HEK293T GSE78099.ZNF786.HEK293T 58 bp overlap